Cucurbita pepo subsp. pepo (vegetable marrow): 111795735
Help
Entry
111795735 CDS
T05351
Name
(RefSeq) zinc finger protein NUTCRACKER-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111795735
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111795735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-met
zf-C2H2_STOP2_C
DUF7128
Motif
Other DBs
NCBI-GeneID:
111795735
NCBI-ProteinID:
XP_023534067
LinkDB
All DBs
Position
LG05:complement(9928688..9930884)
Genome browser
AA seq
424 aa
AA seq
DB search
MQQSLRMMEKMVNDEFTNSFLQIPLAGSNPFSAKKKRNHPGTPDPDAEVIALSPKTLMAM
NRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVRKRVYVCPETSCVHHHPSRAL
GDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDCKAHSKTCGTKEYKCGCGTLFSRRDSF
ITHRAFCDALAEETARVNAATTITAAMTAAGNFNCNFMAGITEPPFMPSIFSCNGLSSRT
NNNNLHPLPQINSGLMYCDPLLNSCHAPPPADYNLNWVFGTKGNNSVQNPPLMSGGGGGG
VSSLYSHQLQQVNQTHMANMSATALLQKAAEIGANSSSDPPFFQEGFVFKCSGGTVQNGS
EFSTSVTQIPIMANENEMYTAKRRRTQSEFMGSGSGFTGGGQTRDFLGVGANTICHTSSI
NGWI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaagcttgagaatgatggagaaaatggtaaatgatgaattcacaaactctttc
ctccaaatcccgctcgccggatccaaccctttttcggccaagaagaagcgcaaccacccc
ggaacccccgatcccgacgcggaagtcatagcgctgtcgcccaagacactgatggccatg
aacagattcgtgtgtgaaatatgtgggaaagggtttcaaagagaccaaaacttgcagctc
catagacgaggacataaccttccatggaagctgaagcaaagaagcaacaaagaggtgagg
aagagagtgtatgtgtgccctgaaaccagctgcgtgcaccaccatccatccagagcgctg
ggggatctcaccgggattaagaagcacttttgtagaaagcatggcgagaagaagtggaag
tgtgagaagtgctctaagagatatgctgttcagtctgattgcaaagcccactccaaaact
tgtggcactaaagagtacaaatgtggctgtggtactctattttccaggagagacagcttc
attactcacagggctttctgcgatgcattagctgaagaaacagcgagagtgaacgccgcc
actacaataacagccgccatgaccgccgccggcaatttcaattgcaatttcatggccgga
atcacagaaccaccattcatgccttcaattttcagctgcaatggcctctcctcaagaacc
aacaacaacaatctacacccacttccccaaattaattcagggctaatgtactgtgaccct
ttattaaattcttgccacgcgccgccaccagctgattacaatctgaattgggtatttgga
acaaagggtaataattcagttcaaaatccgccgttgatgagtggcggtggcggtggcggt
gtttcttcactgtacagccaccaattacagcaagtgaatcaaacccacatggctaacatg
tcagccactgctttgctgcagaaagctgctgaaattggggcaaattccagctcggatcca
ccattttttcaagagggttttgtgttcaaatgcagcggcggtacagttcaaaatgggagt
gaattttcaacttctgttactcaaatcccaattatggcgaatgagaatgagatgtacact
gcaaaacggcgtcgtactcagagtgaattcatgggaagtggaagtgggttcacaggagga
gggcagacaagggattttcttggagttggtgccaacactatttgccacacttcatccatt
aatggatggatttag
DBGET
integrated database retrieval system
