Cucurbita pepo subsp. pepo (vegetable marrow): 111795803
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Entry
111795803 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111795803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111795803
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111795803
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111795803
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
Motif
Other DBs
NCBI-GeneID:
111795803
NCBI-ProteinID:
XP_023534163
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Position
LG01:17053529..17056456
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AA seq
379 aa
AA seq
DB search
MGSCSIRSSTRGDLTDNNLLPPRRRSGIEMAKFSVGGEEDGEDGSSTSSPRAKRKRTSFR
INAVVNFPRHNQRCEEGEEQGFDYCKEETASDEEQRKRHRIDGIEEQVGEDGTEKALCSV
KSCSKNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATC
SWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEIVSYGSESDHEKKCLHAPCKCPLSDCNF
VASSKQLSLHFSSKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLG
NAVKVCCLRPPSLKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFS
SSGKIKLNICIWQNTGAPP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgtgtagcatacgcagtagtacacgtggcgatcttactgataacaatcttctt
cctcctcgcaggagaagcggcatcgaaatggcgaagttttcggttggtggagaggaagac
ggggaggacggatccagtaccagtagccctagggcgaagaggaagagaacctcttttcgc
atcaacgccgtcgttaattttccccggcacaaccaacggtgcgaagaaggggaagaacag
ggtttcgattattgtaaggaagaaactgcgagcgatgaagagcagagaaagcgccatcga
attgacggaatagaggaacaggttggagaggacggtaccgaaaaagctctctgctcggtt
aagtcctgctctaaaaatgtgaaggaaaatggctccatttcgatgtttttgatcgaccct
gaagtgttggattgctccatttgttgtgaacccttgagtgttcccatcttccagtgtgag
aatgggcatattgcatgctcttcctgctgcaacaaacttaagaatagatgtgcaacctgc
tcttggcctatcggctataatcgttgtcgggccgtggagaaggttcttgaatccattaaa
ctaccctgcaaacaatcaaagtacggatgcaaggagatagttagttatggtagtgaaagt
gaccacgaaaagaaatgcctacatgccccgtgtaaatgccctctttctgattgcaacttt
gttgcctcatctaagcaattatcactacatttcagcagtaaacatacagactctgctatc
agctttcagttcagttctagcttcaccatttgcctaaacgctaacgataattaccgcgtt
cttcaagaacaaggtgatggtattctttttattctcagcaatagttttgatcatctggga
aatgctgttaaagtttgctgccttagacctccttccttgaaggaagcattttcttatgat
ctacgagtagaaactcaagatctctctctagttttacaatcttccatgaagaacattcaa
tcatcgtcagattgctgtccctcgacgaggttccttttgattccacgcgatttgttcagt
tcttcaggcaagatcaagttgaatatctgcatatggcaaaacaccggtgcaccaccgtag
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