Cucurbita pepo subsp. pepo (vegetable marrow): 111795964
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Entry
111795964 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111795964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111795964
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111795964
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111795964
NCBI-ProteinID:
XP_023534388
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Position
LG05:5022930..5026668
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AA seq
718 aa
AA seq
DB search
MIHGDTRLTTLELRPEXSFGEIFMAYGSSRSVRFQDDLESSTLPTINGGGVKKIIYNLDG
THIPESTASRKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQAIRRWNKIFLVACLISLF
VDPLFFYLPVVRDNVCIDIGVGLEVVLTIIRTIADVFYTVHILIKFRTAYVAPSSRVFGR
GELVIDTCKIAVRYLRHGFWIDFIAAVPVPQVLIWIVIPNLSGSIMTNTKNFLRFFLIFQ
YIPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACW
RTLCKFDKSCNNGFFDCHKIDDPQRGSWFRTSNIKNTCNPNDPFYQFGIYGDSITFHVTT
SPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIVFAIIVATLGLVLFALLIGNMQKYLQ
STTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEESLLRSLPLDL
RRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTFLVREGDPVNEMLFIIR
GHLDSYTTNGGRTGFFNSCCIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAF
ALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKGRAELMAR
ERYPATNLDSPFSPPTASNSDTCSGNPRIRMNKRCVSDAGVVSSLQKPEEPDFSIVEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgattcatggtgacaccaggttgactacattagaactccggccagagngttcatttggg
gagatctttatggcttatggtagttctagatccgtaagattccaagatgatcttgaatca
tccaccctgcctactatcaatggtggtggcgtgaagaagatcatatacaaccttgatggc
acacatataccagaatcgacggcttccaggaagtctggaagatccttgcgagctaaagtt
ctgtctagagttttctctgaggattatgagagagtgcaaagaaaaatattggatcctaga
ggacaagccataaggagatggaataaaatctttctagtagcttgtttaatctctttgttt
gtagacccacttttcttttacttgcctgtcgtccgggataacgtctgcattgatatagga
gtaggtctcgaagtcgtcctcacaattataagaacaatagctgatgttttctacacagtt
catattctcattaagttccgtacagcttatgtcgcgccctcttctcgtgtatttgggaga
ggagagcttgttatagacacttgtaagatagcagtaaggtatctacggcatggtttctgg
attgatttcattgcagcagtgccagttcctcaggtactgatatggattgtcatccccaac
ctcagtggctcaataatgacaaacaccaagaactttctgcggttctttctcatattccag
tacatcccaaggctttttctcatatttcctctctcaacacaaattgttaaggccactgga
cttgtgacacaaacagcatgggctggagctgcttataacctgatcctgtatatgttggca
agccatgttctaggagcttgctggtaccttctttcaattgagcgacaagaagcatgctgg
agaacactttgtaagtttgacaaatcttgtaacaatggattcttcgactgtcataagatc
gatgaccctcaaaggggctcgtggtttcgtacgagcaacatcaaaaacacatgcaatcca
aatgatcccttttatcaatttggtatatatggtgattcaataactttccatgtcacaacc
tcaccgtttttcaacaagtacttctactgtctttggtggggtctgaaaaatctcagttcc
ttgggacaaaatcttgccacaagcacttttgttggggaaatagtttttgccataattgtg
gcaactcttggactggttctgtttgcattgctcattggcaatatgcagaaatacctccaa
tcgacgactgtccggttagaagagtggagaataaggagaactgatacagagcaatggatg
catcacaggcagctacctccagagctcagacaatctgtccgcagatatgatcagtataag
tgggtagcaactcgaggagttgatgaagaatcgctgcttagaagccttccattggatctc
cgaagagacataaaacgtcacctctgcctcgatcttgttcgaagggttccattgttcgat
caaatggatgaaagaatgctagatgcaatatgcgagagacttaagcctgccttgagcaca
gaaggcacatttctggtgcgagagggagatccagtcaatgaaatgctattcataatcaga
ggacatctcgattcatacaccactaatggcggcagaacaggattcttcaactcctgttgt
atcggtccaggtgatttctgtggtgaggagctactaacatgggcactcgatcctcgtccc
agcgttgtacttccttcttccactcgcacggtcaaagccatctcagaagtagaagcattc
gctctcatagcagaggatttgaaattcgtatcctcccagttcagaagactccacagcaaa
caactcagacacaaatttcgattctactcgcatcaatggcgaacatgggctgcctgcttt
gttcaagcagcatggcggcgatataagagacgcaaaggaagagccgagctcatggctaga
gagaggtatccagctaccaacctcgactcgccattttcaccaccaactgcatcaaattcg
gatacatgttcaggaaaccctagaataaggatgaacaagcgctgtgtgtcggatgctggg
gtagtaagctcactgcagaagccagaagagcccgacttctccattgttgaggaatga
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