KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111796123
Entry
111796123         CDS       T05351                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111796123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111796123
   04121 Ubiquitin system [BR:cpep04121]
    111796123
Spliceosome [BR:cpep03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    111796123
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    111796123
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111796123
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 111796123
NCBI-ProteinID: XP_023534590
LinkDB
Position
LG01:complement(2531777..2541517)
AA seq 951 aa
MDADGSSVPEHDERNGHEARDRGEGQDDFGYSGAEKSSKHRSEDHRKSSRGEEKDHRSKD
RDRSKRRSDDASKEKEKEVKDSERDRVHIRERRKEDRDEHDKERTREKKVKDKDYDREVY
KEKEYERERDRKDRGKDKERGRERELEKDNVRGQDKERGKEKDRDRERERERDRDRKKKE
KDKDRSNENEREKGREKRRDQEEKESYRNIDKERGKEKNLVDDKKGDQNKEKLRDKEGIG
GKNDEERIDWIAHGAKDYMLESDGEDNRDRGVDQGNAVQHLGGEENSDGLKVGAQSSSAM
LEERIRTMKEDRLKKQTEESEVLDWVKRSRKLEEKKLTEKEKALQLSKIFEEQDNIDQGA
SDDDIAAEDITSNLAGVKVLHGIDKVLGGGAVVLTLKDQNILADGDVNEDMDVLENVEIG
EQKQRDMAYKAAKKKTGIYDDKFNDENAGEKKMLPQYDDPAAADEGLTLDGTGRFSNDAE
KKLEELRKRLQGASSVKHFEDLNASVKVSHDYYTQDEMLRFKKPKKKKSLRKKEKLDIDA
LEAEAISSGLGVGDLGPRNDSSRQARKTEQERSEAEMRQNAYQSAYAKADEASRSLQLVQ
SSVRLDDNEDTFIEDDDEDLYKSLERARKLALKKQEAASGPEAVALLATTTISGQTTDDQ
NTKAGELQENKVVFTEMEEFVWGLQLDEESHKPEEEDVFMDDDEAPKEEYHEDEKDKDGG
WTEVKDTAKEEPTPEDNETIAPDETIHEVPVGKGLSSVLKLLKDRGTLKESIEWGGRNMD
KRKSKLVGIIDEDEPKEAKSKDSRLSSLVDYKKEIHIERTDEFGRIMTPKESFRQLSHKF
HGKGPGKMKQEKRMKQYQEELKLKQMKNADTPSLSVERMREAQAQLKTPYLVLSGHVKPG
QTSDPRSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKGDPSNTGTKKPKI
NT seq 2856 nt   +upstreamnt  +downstreamnt
atggacgcggatgggtcatctgtacctgaacatgatgagagaaatggtcatgaggcaaga
gatcgtggggaaggacaggatgactttggttatagtggagcagaaaagtcaagcaagcat
cggagtgaggatcatcggaagagtagtcgaggggaggaaaaagaccatagaagtaaagat
cgagatcgatctaagagacgtagtgatgatgcatcgaaggaaaaggagaaagaggtaaaa
gattcagaaagggatcgagttcatattcgtgaaaggaggaaggaagacagggatgagcat
gataaagaaaggactagggagaagaaagttaaagacaaagattatgacagagaggtttac
aaggagaaagaatatgagagagagagagatagaaaagatcgaggaaaggataaagagcgg
ggaagggagagagaattggagaaggataatgttcgaggacaagacaaagagaggggaaag
gagaaagacagagatagggaaagggaaagggaaagagatagggataggaagaagaaggag
aaggacaaggaccgatcaaatgaaaatgaaagggagaaggggagagagaaacgcagagat
caagaggagaaagaaagctatcggaacattgataaggaaagaggaaaagagaaaaatttg
gtggatgataagaaaggagatcaaaacaaggagaaattacgagataaagaaggaattggc
ggcaaaaatgatgaagaaagaattgattggattgcacatggggctaaggattatatgcta
gaaagtgatggcgaggataacagggacagaggtgttgatcaagggaatgcagtccagcat
ttgggaggtgaagaaaattctgatgggttgaaagttggagctcagtcttcttcagctatg
cttgaggagcgcattcggaccatgaaagaagacaggctaaagaagcaaactgaagaatca
gaggttttagactgggttaaaaggagtcgtaaacttgaggagaagaaacttactgaaaaa
gagaaagccttgcagctctcaaagatttttgaggaacaggacaatattgatcaaggtgca
agcgatgatgatattgcagctgaagatataactagtaatttagctggagttaaagtactt
catggcatagacaaagtactaggaggtggtgcagttgtcctaacccttaaagatcagaat
atcttagctgatggtgacgttaatgaagatatggatgtacttgagaatgtggaaattgga
gaacagaagcagagagacatggcctataaagcagcaaaaaagaaaaccgggatttatgat
gataagtttaatgatgaaaatgctggtgagaagaagatgctgccacagtatgatgaccca
gcagctgcagacgagggcctaactctagatggaactggacgctttagtaatgatgcagaa
aagaagcttgaggagcttcggaaaagattacagggagcttcttcagtcaaacactttgaa
gatcttaatgcatcagtgaaagtctcgcatgattattacactcaagatgaaatgcttcga
tttaagaagcccaagaaaaagaaatctcttcgaaagaaggaaaagctagatattgatgcc
cttgaagcagaagcaatctcctctggattgggtgttggagatcttggtcctcgaaatgat
tctagcaggcaagcacgaaaaacagaacaagagagatctgaagcagaaatgcgacaaaat
gcataccagtcagcctatgctaaagcagacgaggcatcaagatctctacaattagttcaa
agctcagtcagattagatgacaatgaagatactttcattgaagatgatgatgaagacctc
tataagtcgctggagagagcaagaaaattagctcttaagaagcaggaggcagcatcggga
cccgaagcagttgctcttcttgctacaacaacaatcagcgggcagacaactgatgatcaa
aacacaaaagcaggagagttgcaggaaaataaggttgtttttacagaaatggaagaattt
gtctggggtctccagcttgatgaagaatctcataaacctgaagaagaagatgtctttatg
gatgacgatgaagcaccaaaagaagaatatcatgaagatgagaaggataaagatggtggg
tggactgaggtcaaagatactgccaaagaagaacccactcctgaggataatgagacaata
gctcccgatgaaacaatccatgaagttcctgttggaaagggattatccagtgtactgaaa
ctgcttaaggatcgtgggactctgaaggaaagcattgaatggggtggcagaaacatggac
aagagaaagagcaaacttgttggtataatagatgaagatgaaccaaaggaagctaagtca
aaggattcccgtttatcttctttggtggattacaaaaaggagattcacatcgagaggact
gatgaatttgggcgaattatgactccaaaggagtcatttcgccaactttctcacaagttc
catggcaagggacctgggaaaatgaaacaagaaaagcgcatgaagcaataccaagaagag
ttgaagttgaagcagatgaagaatgctgatacaccttcgttatcagtggagagaatgagg
gaagctcaagcacaattaaaaacaccttaccttgttctcagcggtcacgttaaacctggc
caaacaagtgatccaagaagtggttttgctaccgtcgaaaaggatctccccggcggcttg
acacccatgcttggtgacagaaaagtcgagcatttcttggggataaagcgaaaaggtgat
ccttcgaatacaggcacaaaaaagccaaaaatttga

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