KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111796229
Entry
111796229         CDS       T05351                                 
Name
(RefSeq) transcription elongation factor B polypeptide 3 isoform X1
  KO
K15077  elongin-A
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111796229
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111796229
SSDB
Motif
Pfam: Elongin_A Urocanase
Other DBs
NCBI-GeneID: 111796229
NCBI-ProteinID: XP_023534755
LinkDB
Position
LG05:10581617..10584603
AA seq 225 aa
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDL
TPVTDKLWKKFYERQFGRESTNIVSERMQKKKVAFRWIQLYEAKMKDIEKNESEAADRIK
QSYLKENARKQSRQIQICSKVPPASNKRSFGAAGYGPNVTNTKNKLLKKSKIEVLQSQEM
KNIKAWRRNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtatccagtaagaaaagttccatcgttggttgatctttgcgtttacaaagctatagat
aatctgaggtttcttggggatgttggcgaaactgatttacatcttctagagcggattttg
ccacattgcactgttgatcagttgatgcatgtggagaaaagttcagaaggaagagatctg
actccagttacagataaattgtggaaaaaattctatgaaagacaatttggtagagaaagt
accaatattgtatctgagaggatgcagaagaaaaaagtggcatttagatggattcaattg
tatgaggcgaaaatgaaggacatagaaaagaatgagagcgaagctgcagatcgaataaag
caaagctacctaaaggaaaatgctcggaaacaaagtcgtcagatacagatttgcagtaag
gttccccctgcaagcaataagagaagttttggagcagctggatatggccccaacgtgaca
aatactaagaacaagctgctgaagaagtcaaaaatagaagtgcttcagagtcaagagatg
aaaaatataaaagcctggcgaagaaatgcagtgcagaagacttgtgatattccttccaca
aagaagccaatgttttctggaagggattccgcttcaacttctaaaagcactaccactcat
atggccagaaagtggtag

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