KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111796460
Entry
111796460         CDS       T05351                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like isoform X1
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111796460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111796460
   03041 Spliceosome [BR:cpep03041]
    111796460
   03032 DNA replication proteins [BR:cpep03032]
    111796460
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     111796460
Spliceosome [BR:cpep03041]
 Complex A
  U1 snRNP components
   Sm proteins
    111796460
  U2 snRNP components
    111796460
 Complex B
  U1 snRNP components
    111796460
  U4/U6.U5 tri-snRNP components
    111796460
 Complex C
  U2 snRNP components
    111796460
DNA replication proteins [BR:cpep03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     111796460
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 111796460
NCBI-ProteinID: XP_023534840
LinkDB
Position
LG06:complement(136314..139791)
AA seq 132 aa
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGG
ATGRGAVPSARR
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagcaggagcttgggaattccagtgaagctactccatgaggccgcgggtcacgttgtg
tcggtggagcttaaaagcggtgaactttacagaggaagtatgatcgagtgtgaggataac
tggaactgccagctcgaaaacatcacctacactgctaaggatgggaaggtctcgcaactt
gagcatgttttcatccgaggcagcaaagtcaggtttatggtcataccagacatgctgaag
aatgctccaatgttcaagcgtctcgatgctagaattaaaggtaagggcgcctcacttggt
gttggcagaggcagggctgttgctatgcgagctaaagctcaagctgctggccgtggaggt
gcaactggtcggggtgctgtgccatctgcccgaaggtga

DBGET integrated database retrieval system