Cucurbita pepo subsp. pepo (vegetable marrow): 111796595
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Entry
111796595 CDS
T05351
Name
(RefSeq) protein SPA1-RELATED 4-like isoform X1
KO
K26557
protein SPA1-related 3/4
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111796595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111796595
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
111796595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Pkinase
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_WDR75_1st
WD40_RFWD3
WDR90_beta-prop_4th
PK_Tyr_Ser-Thr
Beta-prop_DCAF12
NBCH_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
111796595
NCBI-ProteinID:
XP_023535054
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Position
LG06:complement(4281680..4287858)
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AA seq
837 aa
AA seq
DB search
MWIAMEASFDPLRNRDDISGVCEEDILADPYLRSLKGNDISLRQWLDKPGRSVDALECLH
IFRQIVEIVSIAHAQGIVVHNVRPSCFVMSSFNHVTFIESASCSDSGSDSLEEDGLSSQM
AEVKTSSSPFPSSLGSEGFRSVMTPVNALSETSCMQSSSVYAAQVSLNEGSGECRRKDSR
HVEETENKLQSFPMKQILAMETTWYTSPEEASDGPSSSASDIYRLGVLLFELFCSFSSRE
GKSRIMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSNRPKLSELLQSEFLNESKDELE
ERETAIELRKRIEEQDLLLEFLLLMQQRKQEAARKLQDTISFLCSDIEQVMRHQTNFKKK
IGSHPDLSKDNCLSLNLPSMTPSAGLGSRKRFRPGILVHDIEACGDNVDDSEKSSSDNEN
EQGVLFKSSRLMKNFKKLELAYLLMRGRVNKPSGRQFVKHSSISSDGRGSVVLTERSSVN
NLASKESCNDNRQGGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSLSFDRDG
EFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNRYIKSQIASSNFEG
VVQVWDVTRSQVVTEMGEHERRVWSIDFSSADPTILASGSDDGSVKLWSINQGSSIGTIR
TKANVCCVQFPADSGRSLAFGSADHKIYYYDMRNIRVPLCTFTGHNKTVSYVKYIDSSTL
VSASTDNTLKLWDLSMCTSRVIDSPVLSFTGHMNIKNFVGLSVSDGYIATGSETNEVFIY
HKAFPMPALSYKFQMDPLTSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKILEMV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtggatagcaatggaggcatcatttgatccgcttaggaaccgggatgatatatctggg
gtttgtgaggaagatatattagctgatccttatttgcgttcacttaaagggaatgatatt
agcttaaggcaatggttggataagccaggaagatccgtggatgctcttgaatgtcttcat
atatttaggcaaattgtggagattgttagtattgctcatgctcaaggcattgttgttcat
aatgtgcgtccttcatgctttgtgatgtcttctttcaaccatgtaacgtttattgagtcg
gcatcgtgttcggattccgggtctgattctcttgaggaggatggtttaagtagtcaaatg
gctgaggttaaaacatcgtcttctccgtttccaagcagccttggaagcgagggctttcga
tcggttatgacccccgttaacgctttgtcggagactagttgtatgcagtcgagttcagta
tatgcagctcaagtatcgttaaatgaagggtctggagaatgtagaagaaaagatagcaga
catgttgaagaaacagaaaataagttgcaatcatttccaatgaagcagatattggctatg
gagactacttggtacactagcccagaagaagcttctgatggcccaagttcgagcgcttca
gatatctaccggttaggagttcttctttttgagttattctgctccttcagctcgagagaa
gggaagagtagaattatgtcgagcttgaggcatagagtgcttcctcctcaattgctgttg
aagtggccaaaagaagcttcattttgcttatggttactgcatcccgacccaagtaatcga
cctaagctaagtgagttattgcagagtgaatttctcaatgaatcaaaagatgaactagaa
gaacgtgaaacagcaattgagcttagaaaaagaattgaagagcaggatttactgctagaa
ttccttttgcttatgcaacaaagaaagcaggaagctgctcgtaagctgcaagataccatt
tcatttctgtgcagtgatatcgaacaagttatgaggcaccaaactaatttcaagaaaaag
atcgggtcgcacccagatctttcgaaggacaattgtttgtcattaaatctcccttcaatg
actccttctgctggattgggatcaaggaaacgatttagaccaggaattttggtccatgat
atagaagcatgcggtgataacgttgatgacagtgagaagtcaagttcagacaatgaaaac
gaacaaggtgtactttttaagagttctcgattaatgaagaacttcaagaaattggagtta
gcgtatttgttgatgagaggtagagtaaacaagccatcggggaggcagtttgttaaacac
tcgtcaataagtagcgatggtagggggtctgtagttttgactgaaagaagttcggttaat
aatttggcttcaaaagagagttgcaatgataatcgacaaggcgggtggataagtccgttc
ctggagggtttgtgcaagtatctatcctttagcaagttgaaagtcaaggcagacttgaag
caaggagatctattgaattcctccaacttagtatgttctctcagtttcgatcgagatggg
gaattttttgccacagccggtgttaataggaaaattaaagtgtttggatatgactcaatc
gtgaacgaagaccgtgacattcattaccctgttgttgaaatggctagcaggtcgaaacta
agcagtgtttgttggaatcggtacatcaaaagtcaaattgcttcgagtaattttgaaggt
gtagtgcaggtatgggatgtcacgagaagtcaagtagtcactgaaatgggagaacacgag
aggcgcgtatggtccattgacttttcatcagcggatccaacaatattggctagcggaagt
gacgatggttcagttaagctctggagtatcaatcagggttcaagtatcggcacgatcaga
acgaaagccaatgtctgctgtgtacaatttcctgcggattctggtcggtcccttgcattt
ggttcagctgatcacaaaatttattactacgacatgcggaatatacgagtgcctttgtgc
accttcactggacataacaaaactgtgagttacgtcaagtatatagactcgagcactctt
gtttctgcatccaccgataacaccttgaagctctgggatttgtccatgtgcacatcccgg
gttattgattctccagtcctgtccttcactggccacatgaacataaagaattttgtggga
ctgtcagtctctgatggttacattgctactgggtcagagacaaatgaggtttttatctac
cacaaagcctttccaatgccagcattgtcgtataagtttcaaatggatcctcttaccagt
catgaaatggacgactccgcacaatttatctcttcggtttgttggcgaggccagtcgtct
tcattagtagctgcaaactcaactgggcacatcaaaattttggaaatggtttag
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integrated database retrieval system
