Cucurbita pepo subsp. pepo (vegetable marrow): 111796629
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Entry
111796629 CDS
T05351
Name
(RefSeq) polycomb group protein FIE2
KO
K11462
polycomb protein EED
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111796629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111796629
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111796629
PRC2.2
111796629
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
111796629
NCBI-ProteinID:
XP_023535111
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Position
LG06:complement(4679569..4688135)
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AA seq
370 aa
AA seq
DB search
MAKYSLGSEPVVGSLTPSRKREYRVTNRLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRV
TVYQCLEGGVIAVLQSYVDEDKDESFYTVSWAFNVDGSPFVVAGGINGIIRVIDAGSEKI
YKSFVGHGDSINEIRTQPLKPSLVISASKDESVRLWNVHTGICILVFAGAGGHRNEVLSV
DFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS
NYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWFIKFSCD
FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSFDGSIILSCCEDGT
IWRWDVMTTS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtactctttaggctccgaaccagtggtgggttcgttaactccatcgaggaag
agggaatacagggtcaccaaccggcttcaagaggggaaaaggcctctttatgctgtagtt
ttcaacttcatcgactctcgctacttcaacgtctttgccactgttggcggcaatcgggtt
acagtttatcaatgtcttgaagggggtgttatagccgtgttgcagtcttacgtcgacgaa
gataaggatgagtctttttacactgtaagctgggcgttcaacgtcgatggctccccattt
gttgttgctggtggaatcaatggtataatccgtgttattgatgctggcagtgaaaagata
tataagagttttgttggtcatggtgattcaataaacgaaatcaggactcagccactgaaa
ccatcacttgtgatctctgctagcaaagacgaatctgttcgattatggaatgttcataca
ggtatttgcattttggtattcgctggtgcaggtggtcatcgtaatgaggtcttaagcgtg
gatttccatccatccgatatttatcgcatcgcaagctgtggcatggacaacactgtaaaa
atttggtcaatgaaagagttctggacatacgtggaaaaatcgtttacctggacagatctt
ccatcaaaatttcccacaaagtatgtccagttcccagtgttcatagcatcagttcattcc
aattatgttgactgcagtaggtggcttggtgattttattctttcaaagagtgttgacaat
gaaatagtgttgtgggaacctaaaatgaaggagcagtcacctggagagggtactgtggat
attcttcagaagtaccctgttcctgaatgtgatatttggttcatcaagttttcctgtgat
tttcattataatgcagctgcgataggaaatagggaaggaaagatttttgtttgggaactt
cagtcaagccccccagttcttattgcaaggctgtctcatgcccagtcgaagtctcccatc
agacagacagccatgtcctttgatggaagtataattctgagctgctgtgaagatgggaca
atttggcgctgggatgttatgacaacctcttga
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