Cucurbita pepo subsp. pepo (vegetable marrow): 111796667
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Entry
111796667 CDS
T05351
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cpep03012
]
111796667
Translation factors [BR:
cpep03012
]
Eukaryotic type
Initiation factors
eIF-5
111796667
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
111796667
NCBI-ProteinID:
XP_023535151
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Position
LG06:5819423..5831383
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AA seq
1363 aa
AA seq
DB search
MGRKKPTARDDDGAPAAAQGGGKSKKKTFAVDDDEYSIGTELTEEAQDQEVKVVITGKKK
GKKGNSKASQLKEDDDDDVDDVSEIVITGKKKGKSKKGGSSSAFTASSFGLLEEEGKDGA
NDDDDDDESVLTAEKDDDEEEDSVIKFSGKKKSSKSSKKSGFSAVSAFGALDDEKDEDVI
DDENEEIDDEPVISFTGKKKKSSQGGKKAGNAFTGFSGLDDEDEDRNDDMDDGEDVTTIT
FSGKKKKSSKGSKKSGNLFSAALADEENDGDDSISKPDKLDIDGVEEDDVNVISFSGKKK
SSKKKSSSTFTALSDENALGDEILNTASSNLDSDSSKAKTEAVAESSKNKRKKKKSGRTA
QEEDDLDKILAELGEGPATSKPADPPLSSQEAKVESQPKSQPEVVAPPEKEVEEESTESA
AARKKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKGKVVEKKVPKHV
REMQEAMARRKEEEERRKREEEEKLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLRK
KQEGKLLTGKQKEEQRRLEAMRNQILSNAGGLPLSTSDPSAPAKRPKYQTKKTKPAHHQT
NGSAQTKVVEHVEERIQEKDVAETEILESEKIEAVESTLEEEKSDTIEATVDNEIQEDED
DDEWDAKSWDDAVVDLSLKSSFADEELESESENGMKKDRKNSAPTSGGAVAKPASPAQKS
LPSQPIKSQDIENTKKQHEVEVVDKGKGKDDAVKKKTSIPDATPKQQEENLRSPICCIMG
HVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLI
IDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKVDR
LYGWKTIRNAPILKTMKQQSKYVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSI
VPTSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNG
VLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEH
AIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDRSGEGVCVQASTLGSLEALLEFLKS
PAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFI
ADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVVEGI
AKVGTPVCIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFD
LEDELVSHISRKSIDLLKANYRDDLSTDEWRLVVKLKNLFKIQ
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaagaagcctactgcacgggatgatgacggcgcccctgcggcagcccagggt
ggtgggaagtcgaagaagaagacatttgcagtagatgacgatgagtactctattggaacg
gagttgactgaagaagcccaagatcaggaggtcaaggtcgtgataacggggaagaagaag
ggtaagaagggcaattcgaaagcttcacaacttaaagaagatgatgatgatgatgtggat
gatgtttctgaaattgttatcaccgggaagaagaagggtaagtcgaagaagggtggaagt
agcagtgcttttactgcttccagttttggtttgcttgaggaggagggaaaggatggcgct
aatgatgatgacgatgatgatgaatctgtgttgacagcagaaaaggatgatgatgaagag
gaagattctgtgatcaaattttcaggtaagaagaagtcgtcgaagtcttcgaagaagagt
gggttttctgcagtgtcagcattcggtgccctcgatgatgagaaagacgaagatgtaatt
gatgatgagaatgaagagattgatgatgagcctgttatttcatttacaggtaagaagaag
aagtcatcacaaggtggtaagaaggccgggaatgcatttacaggttttagtggtcttgat
gatgaagatgaggacagaaatgatgatatggatgatggtgaagatgttactacaattacc
ttctctggtaagaaaaagaagtcctctaagggttcaaagaagagtggaaatttgtttagt
gcagcattagcagatgaggaaaatgatggtgatgattctatttcaaagccagataagtta
gacattgatggtgttgaagaagacgatgtcaatgttatttcattttctggcaagaaaaag
tcctctaagaagaaaagcagcagtacttttactgcattaagtgatgaaaatgcgcttggc
gatgaaatacttaatacagcaagtagcaatcttgattctgattcatctaaagctaagacg
gaagcggtggctgaatcttcaaaaaataaaaggaaaaagaagaagagcggaaggactgct
caagaagaagatgatttggataaaattcttgctgagctaggagaggggccagctacatca
aaaccagcagaccctcctctttcttcacaagaggctaaagttgagagccaacctaagagc
caacctgaggttgtagctcctcctgaaaaggaagtggaagaagaaagcacagaatctgct
gcagcaaggaagaagaaaaagaaaaaggagaaagagaaggaaaaaaaggctgcagctgcg
gcagcagcggctgctgaagggaatgatgagaaaatcgaggaggtgaagactgaaattatt
gaacccaaaaaaggtgctgcgaagggtaaagtggtagagaagaaagtgccaaagcatgtt
agggagatgcaagaggcaatggctagaagaaaggaagaagaagagcgaaggaaaagggaa
gaagaagagaaattgagaaaggaagaagaagagagacgtagacaagaagaacttgaaagg
caagctgaggaggcgaagcgtaggaaaaaggaaagagaaaaagagaagctcctacggaag
aaacaggaaggcaagctgttaacagggaaacaaaaggaagaacaacggaggctggaggca
atgaggaatcagatattatcaaatgcagggggcttacctctgtctacatctgaccccagt
gcaccagctaaacgaccaaaataccagacaaagaagacaaaaccagcccaccatcaaaca
aatggtagtgcacagactaaggtagtggaacatgtagaagaaagaatacaagaaaaagat
gtggcagagactgaaatattggaatctgagaagattgaagctgttgagtcgacgcttgag
gaggaaaaatcagatactattgaggctactgtagataatgaaattcaagaagacgaggat
gatgatgaatgggatgcaaagagttgggatgatgctgttgttgatctttccttaaaaagt
tcttttgctgatgaggagctggagtccgaatctgagaatggcatgaaaaaagatagaaag
aatagtgctccaacttcaggcggtgcagttgccaagccagcttcccctgcccaaaaaagt
ttaccttctcagcctataaaatctcaagatattgaaaatacaaagaagcaacatgaggtt
gaagttgtcgacaagggcaaaggaaaagatgatgctgttaagaaaaaaacttcaattccg
gatgctactcctaaacaacaggaagaaaatctccgctcacccatctgttgtattatgggg
catgttgatactggtaaaaccaagctactggactgtattcgtggtacaaatgttcaggag
ggagaggcaggaggaattactcagcagattggggctacatattttcctgctgagaacatt
cgtgaaagaactagggaattgaaagctgatgcaaagctgaaggttcctggcctacttatt
attgatacccctgggcacgaatcgtttacaaacttgcgttctcgtggttcgggtttatgt
gatcttgcaattttggttgttgacatcatgcatggcttagagccacaaacaatagaatct
cttaatctcttgaggatgagaaacacagaatttattattgccctgaataaggttgacaga
ctttatgggtggaaaacaatccgcaatgcacctatacttaagacaatgaagcagcaatcc
aaatatgtgcagaatgagttcaatatgaggcttattcagattattactcaatttaaagag
caaggattaaataccgagctttattataaaaataaagaaatgggggagactttcagtata
gtacctacaagtgctgttactggtgaaggtattcccgacatgttactactattggtgcag
tgggcccagaaaaccatgacgaagaaacttacgtatagtgatgaagtgcagtgtacggtc
ttagaggtcaaggttgttgaaggccatggaacaactattgatgtcatattggttaatggt
gtgctgcatgaaggagatcaaatagttgtttgtggcatgcagggcccaattgttactact
attcgagccctattgacgcctcatccaatgaaggaactccgagtgaagggaacatatctg
catcataaggaaatcaaggctgctcagggaataaaaataactggacagggtcttgagcat
gccattgctggaaccagtcttcacgtggtaggtcctgaggatgacttggaagacattaag
gattcagcaatggaagatatgaagtcagttttgagcaggatagacaggtctggtgaggga
gtctgtgttcaagcatctacacttggttccttggaagcattgttggagtttttgaagtcc
ccagcagtgagcattcctgttagtggaattagtataggacccgttcataaaaaagatgtc
atgaaagcgagtgtaatgcttgaaaagaaaaaagaatatgccactattttggcttttgat
gttaaagtgactccagaagctcgagaacttgcagatgagcttggtgtgaagatttttatt
gctgatatcatctatcacttgttcgaccaattcaaggcctatatcgataatcttaaagag
gaaaagaagaaagaagctgctgaggaagcagtctttccttgtgttcttaagattttacca
aattgcattttcaacaagaaggatccaattgtgttgggggtggatgtggttgaaggcatt
gccaaggttggcacaccagtttgtattcctcaaagagaatttattgacattggtcgcatt
gcatctattgaaaataatcacaaacctgttgattatgcaaagaaagggcagaagattgcc
attaagatagtcgggcactcttcggaggagcagcaaaagatgtacggcaggcatttcgac
ttggaggacgaactcgtcagccatatatcaaggaagtccattgaccttctcaaagccaat
tatcgggatgacttgtccacggacgagtggagactggtggtaaaattgaagaaccttttc
aagattcaatga
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