Cucurbita pepo subsp. pepo (vegetable marrow): 111796669
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Entry
111796669 CDS
T05351
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111796669
Membrane trafficking [BR:
cpep04131
]
Protein recycling
Others
EARP complex
111796669
Endosome - Golgi transport
Tethering complex
GARP complex
111796669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
COG7
Vps54_N
XhlA
HemX
COG5_N
MPH2
FUSC
Motif
Other DBs
NCBI-GeneID:
111796669
NCBI-ProteinID:
XP_023535153
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Position
LG06:3388126..3403097
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AA seq
821 aa
AA seq
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MDKSSALEYINQMFPTEASLSGVEPLMQKIHNEIRRVDAGILAAVRQQSSSGTKAKEDLA
AATSAVEELMSKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDNPKITELREKFKNIKQILKSHVFSD
FSSLGTGKEKEETNLLQQLSDACFVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPPSWHVPYRLCIQFCKKTRKQLEDILDNLKEKPDV
ATLLLALQRTLEFEDELAEKFGGGAQGKENRNEIEEFGREDNNSQNVSDIRKKYEKKLAV
HQGPETDEKDGIKEMSVPGAGFNFRGIVSSCFEPHLTVYIELEEKTLMENLEKLVQEETW
DIDEGSQSNVLSSSMQLFLIIKRSLKRCSALTKNQTLLNLFKVFQRVLKAYATKLLARLP
KGGSGFVAAATGMDGQIKTSDKDEKVICYIVNSAEYCHKTSGELAESVQKIIDTQLVDGV
DMSEVQDEFSAVITKALVTLVHGLETKFDSEMAAMTRVPWGTLESVGDQSEYVNGINMIL
TTSIPVLGRLLSPLYFQFFLDKLASSLGPRFYANIFKCKQISETGAQQMLLDTQAVKTIL
LDIPSLGRQTSGAASYSKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRI
LELKGFKKADQQSILDDFNKHGPGITQPSVSPSVPPIASAAPPAPTITSPTVGLMASRED
VLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagcgctttggaatacattaaccagatgttccccacagaggcgtcgtta
tctggtgtggagccacttatgcaaaagatacataatgaaatacgtcgtgtagatgctgga
attttagcagctgtccgccaacagagtagttcagggacgaaagcaaaggaagatcttgct
gctgctacatcagctgtagaggagctcatgtccaaaattcgagaaataaaaactaaagct
gaacagagtgagacaatggttcaagagatttgtcgtgatattaagaagttggactttgca
aagaaacatattacaacaacaataactgctcttcatcgtctgaccatgttggtctcagct
gttgagcagctccaagtaatggcttcaaaacgacagtacaaagaggcagctgcacagttg
gaggcagtaaaccaattatgcagtcattttgaagcctatagggataatccaaagatcaca
gagctaagggagaagttcaagaatattaaacaaattctgaaatcgcatgtattttctgac
ttctcaagcttaggtactgggaaagagaaagaagaaactaatttacttcagcaattgtct
gatgcttgctttgtcgttgatgctctggagccatctgtgagggaagagttggtgaataat
ttttgcagccgggagctcacatcttacgaacagatatttgaaggagcagaattggcaaag
ttggataaaactgaacgaagatatgcatggataaagcgtcgtatgagaacaaatgaagag
atatggaaaatttttcctccttcatggcatgtcccatatcgtctttgtatccagttctgt
aagaaaacaagaaaacaacttgaggacatcctggataatctgaaagaaaagccagatgtt
gcgactttattgctggcactacagcgaactctagaatttgaagatgaattggcagagaag
tttggaggaggtgctcaagggaaggagaacagaaatgaaattgaggaatttggcagagaa
gataataatagtcaaaatgtttcagacataagaaaaaagtatgagaagaagctggctgta
catcaaggaccagagactgatgaaaaggatggaatcaaagaaatgtcggtgcctggagct
gggttcaactttcggggaatcgtctcttcttgctttgaacctcacttgacagtttacata
gaactagaagagaagacattaatggagaatttggaaaaacttgttcaggaagaaacatgg
gacattgatgaaggaagtcagagcaatgttctatcaagtagcatgcagttgtttctgata
ataaaaaggagcttgaagaggtgcagtgccttgactaagaaccaaacattactcaatttg
ttcaaggtattccagagagtcctaaaagcttatgctaccaagcttcttgcaagacttcca
aagggtggctcgggatttgttgcagcagctactggcatggatggacagataaagacttct
gacaaggatgaaaaagttatctgttacatagtcaattcagctgaatattgccacaagaca
tctggtgaattggctgaaagtgtgcaaaagataattgatactcaactagtggatggcgta
gatatgtcagaggtgcaggatgaattctcagcagtaataacgaaagcgttggtcaccttg
gttcatggtctggaaactaaatttgattcagaaatggcagcaatgactcgcgttccatgg
ggtactcttgaaagtgtgggtgaccaatcagagtatgtaaatggcatcaatatgattctc
acaaccagcattcccgttcttggtagacttctctcacctctttacttccagttcttcttg
gacaagcttgcgtcatctcttggtccacgcttctatgccaacatcttcaagtgcaagcaa
atatcagaaactggagctcaacaaatgcttttggacactcaagctgtgaaaacaattctt
ctcgacattccttcccttggtcgacagacttcaggtgccgctagctattcaaaatttgta
agccgtgagatgagcaaagctgaagctcttttgaaggttatactgtctcccattgattct
gtggcagatacatatcgtgcactattgccagaaggaacaccgatggagtttcagcgaatt
ttggaacttaagggatttaagaaagccgatcagcaaagcatactcgacgatttcaacaaa
cacgggccagggatcacgcagccttcggtgtcaccatcagttccaccgattgcctcggcc
gcccctccagctcctacaattaccagtcctacagtcgggcttatggcatccagggaggat
gtcctgactagagcagctgcactaggacgcggagctgccaccactggattcaaaaggttc
ctggctcttaccgaagctgcaaaagacaggaaagatggacctttcagaaaacttttcaac
ccttga
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