Cucurbita pepo subsp. pepo (vegetable marrow): 111796694
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Entry
111796694 CDS
T05351
Name
(RefSeq) replication protein A 32 kDa subunit A-like
KO
K10739
replication factor A2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030
DNA replication
cpep03420
Nucleotide excision repair
cpep03430
Mismatch repair
cpep03440
Homologous recombination
cpep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111796694
03420 Nucleotide excision repair
111796694
03430 Mismatch repair
111796694
03440 Homologous recombination
111796694
03460 Fanconi anemia pathway
111796694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpep03032
]
111796694
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111796694
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111796694
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111796694
MMR (mismatch excision repair)
111796694
DSBR (double strand breaks repair)
HR (homologous recombination)
111796694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TrmB
RMI2
CARF_Card1
DDRGK
Motif
Other DBs
NCBI-GeneID:
111796694
NCBI-ProteinID:
XP_023535200
LinkDB
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Position
LG06:complement(2178750..2184965)
Genome browser
AA seq
271 aa
AA seq
DB search
MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI
TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL
KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFLSSDSIVKT
PMQNGSSGYPTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKI
PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgttctctagcagccagtttgattccggcagtggatttacgttttctcagaccaatgac
tcttcttcggcgaagaatcgagacacgccgggcctggttccggcaactgtaaaacagata
agcgaagcttcccattctggcgaagagaaggccaacttcgcaatcaacggcgttgacatt
acaaatgttacaatcgttgggaaggtctctgagaaagctgaaaggaatacggacatcaca
tttattgtagatgatggaacaggaagaattggctgcaaaagatgggtaaacgacactttc
gacaccaagcaaatggatgaaatactagatggaatgtatatacgggtgaatgggcatttg
aaaatattccaaagtaacaagcaaatatttgcattctctgtaaggcctattacaaatttt
gatgaaattaccttccactttatcgaatgcatacatgagcacttgcggaattccaagtta
cagaatctcaatggagttggatcgacacagttcctatcctcggattcaattgtgaagact
ccaatgcagaatggctcgagtggatatccgacagcatcttcagtactaccatctgagcag
cacactgttgatgttaagaagaattgtgatgacttgatcctcgactatcttcagctgccc
tccagcgttgccaaagaaagagggatacacagagatgaactttcccaacaactgaagatt
ccaatggagaaaatacttaactccataaggtctcttgaagatgaaggtttgatatattcc
accatagatgagtttcatttcaagtctgctgcatag
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