Cucurbita pepo subsp. pepo (vegetable marrow): 111796720
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Entry
111796720 CDS
T05351
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111796720
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111796720
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
DUF4755
Motif
Other DBs
NCBI-GeneID:
111796720
NCBI-ProteinID:
XP_023535230
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Position
LG06:complement(2689154..2694684)
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AA seq
645 aa
AA seq
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MANQTILQLDIHDHHVVMDNGILAVTLSKPDGNVTGIKYSSIDNVLEVRDKEAHRGYWDL
VWNSGTPGTTGTFDEMRGKEFEVVVQNEEQIELSFKRNYSFKDKEVPLNIDKRFIMLRNS
SGFYSYAIYEHLREWPPFNLPQTRIVFKLRKDKFHYMAIADNRKRWMPLPEDRVGRRGKT
LDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKVHGWISMDPSDDPPVGFWQITPSSE
FRSGGPLKQNLTSHVGPYALAMFLSAHYGGEELVLKLNPDEPWKKVFGPVFFYLNSVPNG
TDPLSLWEDAKIQMTKEVQSWPYSFPASENFPPPNQRGRLTGNLFVLDRYAKQEQMPAAE
AYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDYNLYAWVPGFIGDYRYDV
VISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPDPNPNYINKLYVDHPDRF
RQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDGSHLPTTWQIKFTLDNNI
DKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHDNAIARHGIHGLYRLYSVD
ISGSVLVEGENTILLSQIINNSSFNGVMYDYIRLEGPPSDVSTHP
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcagacgatactccaattggatattcacgatcatcatgtagttatggacaat
ggtatactggccgtgacactgtcgaagccagatgggaatgttacagggataaaatacagc
agcattgacaatgttttagaagttcgtgataaggaggctcatagagggtactgggatctc
gtgtggaactccggcacaccaggaacgacgggaacgttcgatgagatgagagggaaagaa
tttgaagtggttgtgcaaaatgaggaacaaatagagctgtcattcaaaaggaattattca
tttaaggacaaggaagttccattaaacatagacaaaaggttcataatgcttcgtaactcc
tctggattctactcctacgccatctatgagcacttgagggaatggccgccattcaacctt
cctcaaactcggattgtgtttaagctaagaaaagacaagtttcattacatggcgatagca
gataacagaaagagatggatgccactccctgaggatagagtaggccgcagaggcaaaacc
ttggattttcctgaagctgtattactagtccatcctagagaagctgcgttcaagggagag
gtggacgataagtaccaatattcttgtgaaaataaggatcttaaagtgcatggatggata
tccatggatccttccgacgaccctccggtgggtttctggcaaatcactccgagcagcgag
ttccgatccggcggaccgctcaaacagaacctcacctctcatgtgggaccatatgctctt
gcgatgtttcttagcgctcactatggaggagaggagttggtgctgaagctgaatcctgat
gagccgtggaagaaagtgtttgggcctgtctttttctatcttaattctgttcctaatgga
actgatccactttctttgtgggaagatgctaaaattcagatgacgaaggaagttcaaagc
tggccctattcttttccagcttctgagaatttcccaccaccaaaccaacgtggtagattg
actggcaacttatttgtccttgatagatatgctaagcaagagcaaatgccggcagctgag
gcatatgtgggactggcagcgccgggagacgctggatcatggcagaccgaaaccaagggc
taccaattttggaccaaaacagatgcatatggctcgtttagcatcgaaaatgtacgcatc
ggcgactacaatctttatgcttgggttcctggcttcattggtgactaccgttacgacgtt
gtcattagcgtctctgcaggtagtgatatggacgtgggggattttgtttttgagccgcct
aggaatggtccaacgctatgggaaataggcattcctgatcgctctgcagctgaattctat
attcctgatcctaacccaaattacattaacaaattatacgtcgaccatccagatagattc
aggcaatatggactgtgggagagatatgcagaattatatcctgatacagacttagtatat
accgttggagttagtgattacacaaaagattggttcttcgctcatgttaatcggaccaga
aatgatgggtcccatttaccaaccacgtggcaaatcaagtttacactcgataacaacata
gataagagcggtatctataaattgcgagtggctttggccaccgccaatgttgctgaatta
cagattcgggtgaacaatccagaagtagagtcggctctatttacgacaggacaaattggg
cacgataatgcaattgcaagacatggaattcatggactctatcgactctatagtgtcgac
atatcgggatctgtactggtggaaggagagaacaccatcttgctttcacaaattataaac
aattcatctttcaacggcgtcatgtacgattatatccgcctcgaaggccccccatccgac
gtctctacacatccataa
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