Cucurbita pepo subsp. pepo (vegetable marrow): 111796724
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Entry
111796724 CDS
T05351
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpep01001
]
111796724
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111796724
Enzymes [BR:
cpep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111796724
Protein kinases [BR:
cpep01001
]
Serine/threonine kinases: Other
Other
111796724
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111796724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
LisH
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
111796724
NCBI-ProteinID:
XP_023535235
LinkDB
All DBs
Position
LG06:complement(2113381..2123080)
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AA seq
1970 aa
AA seq
DB search
MDPPAMDEQTNEAPGQGEQPPVPSPPPPPPPSETAGTQSQSQEGREEEDEEETKNEEDEL
IAKAHKLMEKITASPDNPNPTVLHALASVLETQESRYMAENGHSSSNGRGSHSIGRLGNV
VRENDEFFELISSKFLSDARYSSSIQAAASRLLISCSLTWTYPHVFEDDVLENIKKWVME
ETGKFSAEDRNWKHESGGKEVSDSEMLRTYSTGLLAVCLAGGSQLVEDVFTARLSAKLMR
FLRIRVLGDVSQKDGNHLIEAKNASSASGVKVRDESRARVRQVMETSHLDDSRTADERSV
EDQVFDRDHDRGLSRLAPPEECWVGEEAPDALATRADGYEMDVEGEDRWHALDFRDGRNK
HGEIDDNARDDSTRRKMSRSRSRGKGRVNEGALEIDHALTSPMSGSRGRSARERSSLKHL
DVKKVPDASRTSGRINSDVSSVERDDNDDCYQECRVGSKDISELVKKAVCAAEAEARAVG
APLEAIKAAGDSAAEVVKSAAFEEFKTSNDEEAAFLAASKAATTVIDAANAVEVSRSQND
SNVSPADPGPTGKEMNEQTEDFFIPNFDSLAQLREKYCIQCLEILGEYVEVLGPVLREKG
VDVCLTLLQRSSKQSETSNAEMLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRVA
QTFFGLSSCLFTIGSLQGIMERVCALPSDVVYQVVELAIQLLECQQDQARKNAALFFAAA
FVFRAVLDAFDAQDGLQKLLGLLNDAASVRSGVNSGALGLSSTGLLQNDRSPTEVLTSSG
KQIAYHTCVALRQYFRAHLLLLVESIRPNKSSRSAARNASSVRAAYKPLDISNEAMDTVL
LLLQKDRKLGAAFVRTRWPAAEKFLNYNGHITMLELCQAPPVDRYLHDLLQYALGVLHIV
TLVPNSRKMIVNATLSNNRVGVAVILDAASIASNFVDPEIIQPALNVLINLVCPPPSISN
KPPVVMQGSQAMSSQTSSTPAVESRDRNGERSVPDRAAYMTGQGDQRERNGDSSIVDRGN
TSATGQATNNNSQNPVATATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRANNG
IKVILHLLQPRIYLPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSG
SQISGTEQGRWQAELSQVAIELISIVTNSGRASALAASDAATPTLRRIERAAIAAATPIT
YHSRELLLLIHEHLLASGLNKAASALLKEAELTPLPLLAAPSSLAYQDSKLETSSTQLQW
PYGRSPCGFLTDKPKLSAREEDTSSKCDFSMSCPRKRPIVFSTPFGTHSKSLPKSLESSS
SAVRKISSTSKQSAAPLSSIETTPIIDTESQCKTPIILPMKRKLSELKDTSIMLSSKRLH
SNEPGLRSPICPTPISSRKGSLITDVGFSTPSTTNMRDQHGRPIPGGFWTDCLDDNQQGS
SQVGLVTPSSHPGNPSDPQPSNSERLTLDSLVVQYLKHQHRQCPTPITTLPPLSLLHPHV
CPEPKRSLDAPWNVTSRLGSREFRSIYGGVHGNRRDRQFVYSRFRPWRTCRDDASALLTC
LTFLGDSRIAVGSHSGEVKVFDTNSSSILESCTSHQSPLTIMESYTSDDSQLVLSSSSLD
VRLWDATSISSGPMHSFEGCKAARFSNAGNIFAAMASEPARREILLYDIQTCQVELKLSD
TNVSSAGRGHAYSHVHFSPSDTMLLWNGVLWDRRGPGPVHRFDQFTDYGGGGFHPAGNEV
IINSEVWDLRKFRLLRSVPSLDQTAITFNASGDVIYAILRRNLEDVMSAVHTRRVKHPLF
AAFRTIDAVNYSDIATIPLDRCVLDFTTEKTDSFVGLITMDDQDEMFSSARVYEIGRRRP
TDDDSDPDDAESEEDEDEDDGDDDSLDPILGPDIDGDGESDSDDMSNDDDDSVSDLDDDD
VDFVMDDVDFEGGPGILDILPEEDDEDDSQLMESFSSEEDEDFVNNGFGF
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggacccaccggccatggatgagcaaacgaacgaggcaccaggtcagggcgaacagcct
ccagttccatctcctcctcctcctcctccgccgtcggaaacggcgggaactcaatcgcaa
tctcaagaaggaagagaggaggaggatgaagaggagactaagaatgaagaggacgagttg
attgccaaggctcataagttgatggaaaagatcactgcctcgcctgataaccctaaccct
accgttcttcatgcccttgcatcagttctcgagactcaagaatccagatacatggcagag
aatggtcattcttctagtaatggtcgcggatctcatagcattggaaggctagggaatgta
gtccgggagaatgatgaattttttgaattgatttcctcgaagtttctttcagacgctaga
tactcatcctccatacaggctgctgcttcaagacttcttataagctgttcactgacttgg
acgtatcctcatgtttttgaggatgatgttctggaaaacataaaaaagtgggtgatggag
gaaactgggaaattttctgctgaagatcgcaactggaaacatgaatcaggaggaaaggag
gtttcagattctgaaatgttacggacatattccactggactccttgctgtatgcttggcg
ggtggaagtcaattggtggaagatgttttcactgctagattatctgcaaaacttatgcgc
tttcttcgtattcgtgttcttggagatgtgagtcaaaaagatggtaatcatttaatagaa
gccaaaaatgcatctagtgctagtggcgtcaaagttagagatgaaagccgagcgagggta
cgacaagttatggaaacatctcatctagatgactcaagaacagctgatgaaagatctgta
gaggatcaagtttttgatagagatcatgataggggcctaagtagattggcaccaccagaa
gaatgttgggttggtgaagaagcacctgatgcattggctacaagggctgatggctatgag
atggatgtagaaggtgaagacagatggcatgctttagattttcgtgatgggaggaataag
catggtgagattgatgacaatgctagagatgattctacaagacgtaaaatgagccgtagc
agatccagagggaaaggaagagtaaatgaaggtgctcttgagattgatcatgccctcact
tcaccaatgtctggtagtagagggcggagtgctagagaaaggagttcgttgaaacatctg
gatgttaaaaaagtacctgatgctagtaggacatctggcaggatcaattctgatgtttct
tctgtggaacgagatgataatgatgattgctaccaagaatgcagagttggatcaaaagat
atttctgagctagtaaagaaagccgtgtgtgctgcagaagctgaagcaagagcagtcggt
gcgcctttagaagccataaaagcagcgggcgattctgctgctgaggttgttaagagtgca
gcttttgaggaatttaaaacttctaacgatgaagaagctgcatttttggctgcttctaag
gctgcaactactgtgattgatgctgccaatgctgtggaggtttccaggagccagaacgat
tcaaatgttagtccagctgatccaggtcccacaggaaaagaaatgaatgaacaaactgaa
gattttttcatccctaattttgactccctcgcacaactgagagaaaaatactgtattcaa
tgtcttgagattcttggggaatatgtggaagtgcttgggcctgttttgcgtgaaaagggt
gtagatgtatgtcttacactactgcaaaggagttccaagcaaagtgaaacatcaaatgct
gaaatgctattgccagatgtgatgaaattaatctgtgctttggctgctcatcgtaagttt
gcagcactctttgttgaccggggtggcatgcagaaactccttgcagttcccagagttgct
caaacattttttgggctctcttcttgtttattcacaattggttccctgcagggaataatg
gaacgggtctgtgcccttccttcagatgttgtctatcaggtggttgagttagccatccag
cttcttgagtgccaacaagatcaggcaagaaaaaatgcagccttattttttgctgctgca
tttgtgttcagagctgttcttgatgcatttgacgctcaagatggcctacagaaattacta
gggctattgaatgatgctgcgtctgtgaggtctggagtgaattctggggctctaggccta
tctagtacaggattgttgcagaatgatcggtctcctactgaagtacttacatcatctgga
aagcaaatagcttatcatacctgtgttgctttacgtcaatatttcagagctcatctcctt
ttgctcgtggaatctattcgtcctaataaaagtagtcgaagtgctgctcgaaatgcttca
agtgtgagggcagcatacaaaccacttgatattagcaacgaggctatggatactgtactt
ctccttttacagaaggatcggaagcttggtgctgcatttgtaagaactcgttggcctgca
gctgagaagttcttaaactataatgggcatataaccatgttggagttgtgtcaggcccct
cctgttgatcgttacttgcatgatttacttcaatatgcattgggggttcttcatattgta
acgttggtgcctaacagccgcaaaatgattgtgaatgccacattgagcaacaatcgtgtt
ggtgtagctgtcattttggatgcagcaagtattgctagtaattttgttgatccagagatc
attcagccggctttgaatgtgttgatcaatcttgtttgccctccaccatcaatcagcaat
aaaccacctgtagtcatgcaaggatcacaagctatgtcttcccagacctctagtacccct
gctgtcgagagtagagatagaaatggagaacgcagtgtcccagatcgagctgcttatatg
actggtcaaggagatcaaagagaacgcaatggggattctagcattgtagatcgaggcaat
acttcggcaactggtcaggctactaacaataattctcaaaatcccgttgcaacagcaaca
tcaggattggttggggatcgtcgaatatctttaggtgcaggagcaggctgtgctggtctt
gctgcacaattagagcaagggtatcgtcaagccagggaggcagtccgtgctaacaatggt
ataaaggttattttgcatcttctccagccaaggatctatctgcctcctgcagctcttgat
tgtctccgagctcttgcgtgccgggtcctgcttggtttagctagagatgatacaatagca
cacatattgacaaaacttcaggtggggaaaaaattatcagaactaattcgagattcaggg
agccagatatcaggaacagagcaaggtaggtggcaagcggagctttcccaggtcgctatt
gagcttatttcaattgtaacaaattctgggcgggccagtgcgttggcagctagtgatgct
gctacccccactttgagacggatagaaagagcagccatagctgctgctacgcctatcact
taccattccagggagcttcttcttttaattcacgaacatcttctagcttctggcttaaac
aaagctgcctctgcactgctgaaagaggccgagttgacacctttacctcttttagcagct
ccatcatctcttgcataccaagactccaagctggagacatcctcaacccaactgcagtgg
ccctatggtcgatccccatgtggatttctgactgataagccgaagctttctgcacgagaa
gaagatacaagttcgaaatgtgattttagcatgtcttgtccaaggaaaaggcccatagtc
ttctccactccttttggtacgcattcaaagtctctgcctaaatccctggaatcatcttcc
tcagcagttagaaaaatttctagtacttcaaaacaatctgctgcgcctctatcttcaatc
gaaacaaccccaatcatcgacaccgagtctcaatgtaaaacacccattatattgccaatg
aagcggaagttgtcagaattgaaggacaccagtatcatgttgtcctcgaagcgacttcac
tctaacgagccaggactccgatctcctatttgtcctactcctatttcgtctcgcaaaggt
agtttgattacagatgttgggttttctacgccgagcactactaacatgagagatcagcat
ggacgaccaatacctgggggtttttggacggattgtttggatgacaaccaacaaggcagt
tcccaagttggtttggttacaccatcatcgcatcctgggaatccaagtgatccacaaccc
agcaacagtgagaggctaactctggactcccttgttgttcagtatctaaaacaccagcat
cgccaatgtccaacgccgataactactcttccaccattgtctcttttgcaccctcacgtt
tgtcctgaaccaaaacgaagccttgacgccccatggaatgtaacatctcgccttggatct
cgtgaatttagaagtatatatggtggtgttcatggaaatcgtagggaccgtcagtttgtc
tacagcaggtttaggccttggcgaacttgtcgcgatgatgctagtgctcttttgacttgt
cttactttcctcggggactcgagaattgctgtcggtagccactcaggggaggtcaaggtc
tttgataccaacagtagcagcatattagaaagttgcaccagccatcagtctcctttaacc
ataatggagtcgtatacttctgacgacagtcaacttgtgctctcatccagctccttagac
gtaaggttgtgggatgcaacatccatttctagcgggccaatgcattcattcgaaggatgc
aaggctgcaaggtttagcaatgctgggaacatttttgctgcaatggcatccgagcctgct
cgaagagaaatacttttgtatgatattcaaacctgccaagtcgaattgaaactatccgac
accaatgtcagttctgcaggtcgaggacatgcttattcacatgtacacttcagcccttcg
gatacaatgttgctctggaacggagtgttatgggatcgacgtggaccagggcccgtccat
cgctttgatcagttcactgattatggtggtggtggttttcatccagctggcaacgaggta
attattaattccgaggtctgggatcttcgaaagtttaggcttctccgcagtgtaccttcg
ctcgaccaaacagcgattacattcaatgcgagtggtgatgtaatttatgcaatcttgagg
agaaatcttgaagatgttatgtcagctgttcatacccgtcgtgtcaaacatccgctcttt
gctgcgtttcgaaccatcgatgcagtgaactattcagatatcgccactattcctctagat
cgttgtgtcctagacttcacaacggagaaaactgattccttcgttggtttgatcacaatg
gatgatcaagatgaaatgttttcttcagcaagggtctatgaaattggtagaagaaggccc
actgacgatgattcggatcctgacgacgccgagagcgaggaagatgaggacgaagacgac
ggtgatgacgatagtttggatccaattttgggtcctgatattgatggggatggtgagagt
gattctgatgatatgagtaacgacgatgacgacagtgtgagtgatctcgatgacgacgac
gttgactttgtgatggatgatgttgactttgagggtggtcctggaattttggatattttg
ccagaagaagatgatgaagatgatagtcaactgatggaatcatttagcagtgaggaggat
gaggattttgtcaataacgggtttggcttttga
DBGET
integrated database retrieval system
