Cucurbita pepo subsp. pepo (vegetable marrow): 111796878
Help
Entry
111796878 CDS
T05351
Name
(RefSeq) transcription factor MYB3R-1-like
KO
K09420
transcriptional activator Myb
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111796878
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111796878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Rap1_C
Motif
Other DBs
NCBI-GeneID:
111796878
NCBI-ProteinID:
XP_023535442
LinkDB
All DBs
Position
LG06:2399474..2407514
Genome browser
AA seq
1005 aa
AA seq
DB search
MEGDKTISTPSDKPEIRDQRIRALHGRTSGPTRRSTKGQWTPEEDEILRQAVDHFKGKNW
KKIAGCFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIELVNKYGPKKWSTFATHLP
GRIGKQCRERWHNHLNPNINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKN
HWNSSVKKKLDSYVASGLLAQFQDPIPAGQPNQLPVSSSKVLGSGNDSGLNGMDTEEISV
CSQDPSVADSFMSDSACATLHKRKEFHLVEDLELGKEQSISPVSSSEPYYPPMEAITCPI
AEFGQEVGHSLSPSEKNASDCRTSSNRQHQCDLNEFPNISSLQLGIEASQFKAIGTRMGE
SHGASSSAQTSSMIKGAAASAQAECMFISDDECCRVLFSDAKSDRCDLTSNLKEGSSVSE
MCDYKVPVHSFSTPKVENNHALASQIHNPPSGTDVQEKNSVHQSGMPIPSTVSVNNDMIL
LGGTGPNQLFVGALEHGYVTSQQNAFAYNGGTSKSSYFEVADNPEMQEQPGGAEDLPKPM
CINPFATAADVTGTCSRSDERAKQNGEHQDSGALCYEPPRFTSLDVPFFSCDLIQSGSEM
QEYSPLGIRQLMMTSLNSVTPFRLWDSPSRDTSPDAVLKSAAKTFTSTPSILKKRHRDLM
SPLSERRIDKKLETNVTSSLTENFSRLDVVFNDVADKASILSPSNLKRSIEDSAEDKENV
YCTFEVREEKTDDGNESRNATLSENNFPKSSSQDYTKQETADTEMICVQSAAEIVPPGIL
AERDANDLFLHTVDKKTLSSSTGIKKHYSPSRLADDVSKVSSGNSHGLPCSSPPTICGSY
PDGPTHELPVTSSSFHEKMDSNRPQITVKGIASLPETGETPFKRSIESPSAWMSPWFFNS
FLPGPRIDTEISIEDMGYFSSPKGRSFDAIGLMKQVSERTAAACANAHEVLGNETPETLL
KGTSMKHLHCDETLLAECRVLDFSECGSPGKAETECVKTTAATSR
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgataagaccatctcaacaccttcagacaaacctgagattcgtgatcagagg
atacgtgctctccatgggagaaccagtggccctacaagacgttcaacaaagggacagtgg
acacctgaagaggatgaaattttgcggcaagcagttgatcatttcaaaggcaaaaactgg
aagaaaatagctggatgtttcaaggatcggactgatgtacaatgtctacataggtggcaa
aaggttttaaaccccgaacttgtcaagggtccatggtctaaagaggaggatgaaattatc
attgaactggtgaacaaatatggaccaaaaaagtggtctacatttgcaactcatctacct
ggacgtattggtaagcaatgccgagaaaggtggcacaatcacctcaatcctaatataaac
aaagaagcatggacccaagaagaggagttagctttaattcgtgctcatcaaatttatggg
aacagatgggcagagctaacgaagttcttacctggaaggacagacaatgccataaaaaac
cactggaacagttctgtcaaaaagaaattggattcttacgtggcctcaggcttgcttgca
caatttcaagatccaattcccgctggacaaccaaaccaactcccagtttcatcttcaaaa
gtgcttggtagtggaaatgacagtggcttaaatggaatggatacagaggagatttcagtg
tgcagtcaagatccatcagttgctgatagctttatgagtgattcagcatgtgcaactctg
cacaagagaaaggaatttcatttagttgaggatttggagttgggaaaggagcaaagtatc
agcccagtatccagttctgaaccctattaccctcctatggaagcaattacttgtcccatt
gctgagtttggtcaagaagtcggtcactctttatcaccttcagagaaaaatgcctctgat
tgtagaacatcttcaaatagacagcaccaatgtgatttgaatgagtttcctaacatctct
tcgttacaattgggtatagaagcatcgcaatttaaagcaattggcactaggatgggtgaa
agtcatggagcttccagttctgctcaaacttcttcaatgataaaaggagctgcggcctct
gcccaagcagagtgcatgtttatatctgatgatgagtgttgcagggtcctattctcagat
gcaaaaagtgacagatgcgatctgactagtaatcttaaagaaggctcttctgtatcagaa
atgtgtgattacaaagttccagttcactcttttagcactccaaaagttgaaaataaccat
gccttagcttcacaaatacataatcctccttcaggaactgatgtgcaggaaaaaaattcc
gtgcaccagtccggcatgccgattccatccacggtttctgtcaacaatgacatgatttta
ttaggtggtactggacccaaccaactatttgtaggagccctagagcacggatatgtaact
agccaacagaatgcgtttgcctataatggtggaacatccaagtcttcctatttcgaggtt
gcagataacccagaaatgcaagaacagcctggtggagcagaagacctgccaaaaccaatg
tgtataaatccatttgctacagcagcagatgtcaccggtacttgttctcgttcggatgaa
agagcaaaacaaaatggcgaacatcaagactccggtgctctttgttacgagcctcctcgt
tttactagtttagatgttccgtttttcagctgtgatctcatacaatctggaagtgaaatg
caggagtacagcccacttggtatacgccagttgatgatgacttctctaaattctgttact
ccattcagattatgggattcaccatctcgtgatactagtccagatgctgtactgaaaagt
gctgccaaaacttttaccagtactccatccattttgaagaaacgccaccgtgatttaatg
tctcctctctctgaaagaagaattgacaaaaagctggaaaccaatgtcacatctagtttg
acagaaaacttttcacgtttggatgttgtgttcaatgatgtggctgataaagcttctata
ctgtctccatctaacctaaaaaggagtatcgaagattctgctgaagataaagaaaatgtt
tattgtacctttgaagtgagagaagagaagacagatgacggtaatgaatctcgaaacgca
acgctgtcggagaataattttccaaaaagttcttcccaagactatacgaaacaagagact
gctgataccgagatgatatgcgttcaatccgcagctgaaattgtacctcctggaatcctg
gctgaacgtgatgcgaatgacttgtttcttcacactgttgataaaaaaactctcagttca
agtacaggaattaagaaacattacagtccaagcagactagcagacgatgtttcaaaggtg
tcttctgggaattctcatgggctaccttgcagcagcccgcctaccatctgcgggagttat
cctgatggaccgacgcacgaactccccgtcacatcatcgtcttttcatgagaagatggat
tctaatcggccacagattacggtcaagggaattgcttcgttacctgaaactggtgaaact
ccatttaagagaagtattgaatccccttcagcatggatgtcgccttggttcttcaattct
ttcctacccggcccgaggattgatacggaaatatcgatcgaggacatgggatatttttcg
agccccaagggaagaagctttgatgcaattgggttaatgaaacaagtaagcgagcgaacg
gcagctgcatgtgccaacgcccatgaggtgttgggaaatgaaactccagagacactactc
aagggaacgagcatgaagcatctccattgtgatgaaactcttctggcagagtgtcgggtg
ctcgacttcagcgaatgcggctctccggggaaagcagagacagagtgtgtgaaaactaca
gctgcgacctccaggtag
DBGET
integrated database retrieval system
