Cucurbita pepo subsp. pepo (vegetable marrow): 111796905
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Entry
111796905 CDS
T05351
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111796905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111796905
04147 Exosome [BR:
cpep04147
]
111796905
04090 CD molecules [BR:
cpep04090
]
111796905
Enzymes [BR:
cpep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111796905
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111796905
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111796905
CD molecules [BR:
cpep04090
]
Proteins
111796905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
AAA
RsgA_GTPase
Zeta_toxin
DEAD
AAA_30
DUF87
nSTAND1
P-loop_TraG
APS_kinase
Cytidylate_kin
ECH_2
Motif
Other DBs
NCBI-GeneID:
111796905
NCBI-ProteinID:
XP_023535471
LinkDB
All DBs
Position
LG06:complement(296429..301533)
Genome browser
AA seq
1250 aa
AA seq
DB search
MEIGSNGGSDQDPPPKMEEQEEKPSKKISVSFFGMFAAADAIDCLLMLFGSLGAFVHGAA
LPVFFVLFGRIIDSLGHFSRHPHTLSSRIAENALLLIYLGLIVLASAWIGVAFWMQTGER
QAARLRMKYLNSILKKDIHFFDTKAKDCNIIFHISSDMVLVQDAIGDKIGHALRYFSQFV
VGFGIGFTSVWKLTLLTLAIVPLVAIAGGAYTIIMSTLSEKGEAAYAQAGKTAEEVIAQI
RTVYAYVGESKAVEKYSESLQNAFKHGKRSGFAKGIGVGFTYSLLFCAWALLLWYASLLV
LRHETNGGKAFTTIINVIFSGFALGQAMPNLAAIAKGRVAAANIFSMIDSGYESWSRSDN
EVALSNVAGKIEFSEVSFAYPSRPQLIFEELSFSISAGKTVAVVGPSGSGKSTIVSMVQR
FYEPSSGKILLDGYDLRSLDLKWLRRQMGLVSQEPALFSTTIAANILFGQEHAAMDEIIA
AAQAANAHSFIQELPDGYSTSVGEGGTQLSGGQKQRIALARAVLRNPKILLLDEATSALD
AESELIVQQALDRIMSNRTTIIVAHRLSTIQDADTITVLKNGQIVESGNHSELMSNNGEY
AALVSLQVSDQVNDCSIISPSRSSGRSSFRESFSFHNSIQDSKSFRETELQSANKDSKTS
NSPPSIWELLKLNAPEWPYAVLGSIGAILAGIQAPLFALGITHVLSAFYSPHHSQIKEEV
QHVAYVFIGVSILTIPIYLLQHYFYTLMGERLTARVRLLLFSAILSNEVGWFDLDENNTG
SLTSILASDATLVRSALADRISTIVQNLALTVAAFVIAFIFSWRLAAVVAASLPLLIGAS
ITEQLFLKGFGGDYSRAYNRATAVAREAIANIRTVAAFGAEEKISSQFAFELNKPNKQAL
VRGHIAGFGYGISQFFAFCSYALGLWYASTLIKHKHSNFGDIMKSFMVLIITSLAIAETL
ALTPDIVKGSQALGSVFNILHRRTAIDSDNRSAEMVTNIRGDIEFRNVSFKYPARPDITI
FEDLNLRVSAGKSLAVVGRSGSGKSTVIALVMRFYNPMSGTISIDGRDITSLNLRSLRMK
IGLVQQEPALFSTTVHENIKYGNQEASEIEVMKAAKAANAHGFISRMPNGYATHVGDRGV
QLSGGQKQRVAIARAILKEPSILLLDEATSALDAASEKQVQEALDRLMEGRTTILVAHRL
TTIRNANRIAVLKSGRVVEIGSHDSLLKNPNSIYKQLVNLQQETSVQSLE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggagattgggtccaatgggggatcagaccaagacccacctcccaaaatggaggaacaa
gaagagaaaccaagcaagaagataagtgtttccttttttggtatgtttgctgctgctgat
gcaattgattgtttgttgatgctgtttggaagcttaggagcgtttgttcatggggctgct
cttcctgttttctttgttctgtttggtcggatcatcgattctttgggacatttttccaga
catccccatacactgtcttctcgtattgctgaaaatgctttgttgttgatctatcttggc
ctcattgtgttggcatcagcatggataggtgtggctttctggatgcaaacgggagagagg
caggcggcaaggttgagaatgaagtatctcaactcaattttgaagaaagatatacacttt
ttcgacacgaaggccaaagattgcaacataatcttccatatctcaagtgatatggttctg
gttcaagatgccataggcgacaagataggccatgctttgcgttatttctcccaattcgta
gttggatttggcattggatttacatcagtttggaaactgacgcttctgactttggccatt
gttccattggtagccattgcaggaggtgcatacacaatcatcatgtccactctatctgaa
aaaggtgaagctgcctatgctcaagctggaaagacggctgaagaggttattgcacagatt
cgaacagtgtacgcatatgtaggagaaagtaaagccgtggagaaatattccgagtcgctt
caaaatgcattcaaacatgggaagaggagtggttttgctaaaggaattggcgtggggttt
acatatagtcttctgttttgtgcctgggctttgctcctctggtatgccagcctactcgtc
ctccgccacgaaacaaatggagggaaagcttttacgacgattatcaatgtcatcttcagt
ggatttgcgctcggtcaagctatgccgaatctcgctgccatcgcaaaaggtcgggtggct
gcagccaacatctttagcatgattgactcaggttatgaatcgtggtcgaggtcggataat
gaagtagcattgtcaaatgtagcagggaagattgagttttctgaggtttcctttgcttat
ccctcccgaccccaactgatttttgaggagttaagcttctcaataagtgctggaaagaca
gttgcagttgttggccccagtggctcaggaaagagtaccattgtttccatggttcagcgt
ttctacgaaccgtcttcaggtaagatactattggatggatatgatcttaggtcccttgat
ttgaaatggttgagaaggcaaatggggttggttagtcaagagcctgccttgtttagtacc
acaatagctgccaatattctttttggtcaagaacatgcagccatggatgagatcattgca
gctgctcaagctgctaatgctcattccttcattcaagaactaccagatggttactcaact
tcggtcggagagggagggacgcagctttcaggtgggcaaaagcagaggattgcccttgca
agggcagttttacgaaatccaaaaatattacttctagatgaggcaaccagtgctcttgat
gcagaatcagaactcattgttcagcaggcactggacagaatcatgtcgaatcgaacgacg
atcatcgttgcacatcgactttccacaattcaagatgctgataccatcactgtcctgaaa
aacggtcaaattgttgagagtggaaatcattcagaattgatgtcaaacaatggtgagtat
gcagctctagtaagcttgcaagtatcagaccaagtgaatgattgtagcataatatctcca
tctaggagttccgggcgttctagttttcgagaatcttttagctttcataacagtatacaa
gattccaagtcattcagagagactgagctacaatcagcaaacaaagattcaaaaacttcg
aactctcctccgtcgatatgggagctactgaagttaaacgcacccgagtggccttatgca
gtactaggatcgatcggggcaattcttgcaggcattcaagctcctttgtttgcacttggc
ataacccatgtcctatctgcattttattctcctcatcattctcaaatcaaagaagaggtc
caacatgtcgcctatgtgtttattggagtttctattctcaccattcctatatatctgttg
caacactacttctataccttaatgggagagagactaaccgctcgtgttcgtttgctgtta
ttctcagctatcctttccaacgaagttggttggtttgatttagatgagaacaacactgga
tccttgacatcaatcttggcatccgatgcaacgttagtaagaagtgctctggctgaccgt
atatcgacgatcgtgcagaatctagcgctcactgtggctgcatttgttattgcctttata
ttcagttggcgccttgcagctgttgttgctgcttctttgccccttcttattggagcttca
ataactgagcaactatttctcaagggcttcggaggagattatagtcgagcgtataaccgt
gcaacagctgtagcacgcgaagccatcgccaatattcgcacggttgcagcatttggtgct
gaagaaaagatctcaagtcaatttgcctttgaattaaacaaacccaataagcaggccctt
gtgagaggccatattgctggctttggctatggcatatcccagttctttgcattctgttcc
tatgcacttggcctttggtatgcatcaactcttatcaaacacaaacactcaaactttggg
gacatcatgaaatctttcatggttttgataatcacatcattagcaatagcagaaactctg
gctcttacacctgatattgtaaaaggctctcaagcattaggatcagtcttcaatattctc
catcggagaaccgccatagattctgacaatcgatccgccgagatggtaactaacatcagg
ggcgacattgaattcagaaacgtgagttttaagtaccctgcaagaccagatatcacaatc
tttgaggatttgaatctaagggtatctgcaggcaagagtctagctgttgtcggtcgaagt
gggtcaggaaagagcacggtgatagcattggtgatgagattctacaaccccatgtcggga
actatctctatcgatgggcgtgacattacaagcttaaacttgagatcattaaggatgaaa
attgggttggttcaacaagaaccagctttgttttccacaacagtacatgagaacatcaag
tatgggaatcaggaggcatcagaaattgaagtaatgaaagcagctaaggcagctaacgct
catggcttcatcagccgaatgccgaatggctatgcaacgcacgttggcgaccgaggagtg
cagctctctggagggcagaagcagagggtggcaattgctagagcaatactgaaagagcct
tccattcttctgttggatgaagcaacaagtgcattggatgcagcctctgagaagcaggtg
caggaggctcttgacaggctaatggaaggccggacaacaattctcgtcgcccaccggctt
acaaccatccgcaatgccaacagaatcgccgtgctcaagagtggcagagtggttgagatt
ggcagccatgatagcttactgaagaaccccaacagtatctataaacagttggtgaactta
cagcaggaaacgagtgtgcaatcgcttgagtag
DBGET
integrated database retrieval system