KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111796905
Entry
111796905         CDS       T05351                                 
Name
(RefSeq) ABC transporter B family member 13-like
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    111796905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cpep02000]
    111796905
   04147 Exosome [BR:cpep04147]
    111796905
   04090 CD molecules [BR:cpep04090]
    111796905
Enzymes [BR:cpep01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     111796905
Transporters [BR:cpep02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    111796905
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111796905
CD molecules [BR:cpep04090]
 Proteins
  111796905
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 AAA_29 AAA_22 ABC_ATPase AAA RsgA_GTPase Zeta_toxin DEAD AAA_30 DUF87 nSTAND1 P-loop_TraG APS_kinase Cytidylate_kin ECH_2
Other DBs
NCBI-GeneID: 111796905
NCBI-ProteinID: XP_023535471
LinkDB
Position
LG06:complement(296429..301533)
AA seq 1250 aa
MEIGSNGGSDQDPPPKMEEQEEKPSKKISVSFFGMFAAADAIDCLLMLFGSLGAFVHGAA
LPVFFVLFGRIIDSLGHFSRHPHTLSSRIAENALLLIYLGLIVLASAWIGVAFWMQTGER
QAARLRMKYLNSILKKDIHFFDTKAKDCNIIFHISSDMVLVQDAIGDKIGHALRYFSQFV
VGFGIGFTSVWKLTLLTLAIVPLVAIAGGAYTIIMSTLSEKGEAAYAQAGKTAEEVIAQI
RTVYAYVGESKAVEKYSESLQNAFKHGKRSGFAKGIGVGFTYSLLFCAWALLLWYASLLV
LRHETNGGKAFTTIINVIFSGFALGQAMPNLAAIAKGRVAAANIFSMIDSGYESWSRSDN
EVALSNVAGKIEFSEVSFAYPSRPQLIFEELSFSISAGKTVAVVGPSGSGKSTIVSMVQR
FYEPSSGKILLDGYDLRSLDLKWLRRQMGLVSQEPALFSTTIAANILFGQEHAAMDEIIA
AAQAANAHSFIQELPDGYSTSVGEGGTQLSGGQKQRIALARAVLRNPKILLLDEATSALD
AESELIVQQALDRIMSNRTTIIVAHRLSTIQDADTITVLKNGQIVESGNHSELMSNNGEY
AALVSLQVSDQVNDCSIISPSRSSGRSSFRESFSFHNSIQDSKSFRETELQSANKDSKTS
NSPPSIWELLKLNAPEWPYAVLGSIGAILAGIQAPLFALGITHVLSAFYSPHHSQIKEEV
QHVAYVFIGVSILTIPIYLLQHYFYTLMGERLTARVRLLLFSAILSNEVGWFDLDENNTG
SLTSILASDATLVRSALADRISTIVQNLALTVAAFVIAFIFSWRLAAVVAASLPLLIGAS
ITEQLFLKGFGGDYSRAYNRATAVAREAIANIRTVAAFGAEEKISSQFAFELNKPNKQAL
VRGHIAGFGYGISQFFAFCSYALGLWYASTLIKHKHSNFGDIMKSFMVLIITSLAIAETL
ALTPDIVKGSQALGSVFNILHRRTAIDSDNRSAEMVTNIRGDIEFRNVSFKYPARPDITI
FEDLNLRVSAGKSLAVVGRSGSGKSTVIALVMRFYNPMSGTISIDGRDITSLNLRSLRMK
IGLVQQEPALFSTTVHENIKYGNQEASEIEVMKAAKAANAHGFISRMPNGYATHVGDRGV
QLSGGQKQRVAIARAILKEPSILLLDEATSALDAASEKQVQEALDRLMEGRTTILVAHRL
TTIRNANRIAVLKSGRVVEIGSHDSLLKNPNSIYKQLVNLQQETSVQSLE
NT seq 3753 nt   +upstreamnt  +downstreamnt
atggagattgggtccaatgggggatcagaccaagacccacctcccaaaatggaggaacaa
gaagagaaaccaagcaagaagataagtgtttccttttttggtatgtttgctgctgctgat
gcaattgattgtttgttgatgctgtttggaagcttaggagcgtttgttcatggggctgct
cttcctgttttctttgttctgtttggtcggatcatcgattctttgggacatttttccaga
catccccatacactgtcttctcgtattgctgaaaatgctttgttgttgatctatcttggc
ctcattgtgttggcatcagcatggataggtgtggctttctggatgcaaacgggagagagg
caggcggcaaggttgagaatgaagtatctcaactcaattttgaagaaagatatacacttt
ttcgacacgaaggccaaagattgcaacataatcttccatatctcaagtgatatggttctg
gttcaagatgccataggcgacaagataggccatgctttgcgttatttctcccaattcgta
gttggatttggcattggatttacatcagtttggaaactgacgcttctgactttggccatt
gttccattggtagccattgcaggaggtgcatacacaatcatcatgtccactctatctgaa
aaaggtgaagctgcctatgctcaagctggaaagacggctgaagaggttattgcacagatt
cgaacagtgtacgcatatgtaggagaaagtaaagccgtggagaaatattccgagtcgctt
caaaatgcattcaaacatgggaagaggagtggttttgctaaaggaattggcgtggggttt
acatatagtcttctgttttgtgcctgggctttgctcctctggtatgccagcctactcgtc
ctccgccacgaaacaaatggagggaaagcttttacgacgattatcaatgtcatcttcagt
ggatttgcgctcggtcaagctatgccgaatctcgctgccatcgcaaaaggtcgggtggct
gcagccaacatctttagcatgattgactcaggttatgaatcgtggtcgaggtcggataat
gaagtagcattgtcaaatgtagcagggaagattgagttttctgaggtttcctttgcttat
ccctcccgaccccaactgatttttgaggagttaagcttctcaataagtgctggaaagaca
gttgcagttgttggccccagtggctcaggaaagagtaccattgtttccatggttcagcgt
ttctacgaaccgtcttcaggtaagatactattggatggatatgatcttaggtcccttgat
ttgaaatggttgagaaggcaaatggggttggttagtcaagagcctgccttgtttagtacc
acaatagctgccaatattctttttggtcaagaacatgcagccatggatgagatcattgca
gctgctcaagctgctaatgctcattccttcattcaagaactaccagatggttactcaact
tcggtcggagagggagggacgcagctttcaggtgggcaaaagcagaggattgcccttgca
agggcagttttacgaaatccaaaaatattacttctagatgaggcaaccagtgctcttgat
gcagaatcagaactcattgttcagcaggcactggacagaatcatgtcgaatcgaacgacg
atcatcgttgcacatcgactttccacaattcaagatgctgataccatcactgtcctgaaa
aacggtcaaattgttgagagtggaaatcattcagaattgatgtcaaacaatggtgagtat
gcagctctagtaagcttgcaagtatcagaccaagtgaatgattgtagcataatatctcca
tctaggagttccgggcgttctagttttcgagaatcttttagctttcataacagtatacaa
gattccaagtcattcagagagactgagctacaatcagcaaacaaagattcaaaaacttcg
aactctcctccgtcgatatgggagctactgaagttaaacgcacccgagtggccttatgca
gtactaggatcgatcggggcaattcttgcaggcattcaagctcctttgtttgcacttggc
ataacccatgtcctatctgcattttattctcctcatcattctcaaatcaaagaagaggtc
caacatgtcgcctatgtgtttattggagtttctattctcaccattcctatatatctgttg
caacactacttctataccttaatgggagagagactaaccgctcgtgttcgtttgctgtta
ttctcagctatcctttccaacgaagttggttggtttgatttagatgagaacaacactgga
tccttgacatcaatcttggcatccgatgcaacgttagtaagaagtgctctggctgaccgt
atatcgacgatcgtgcagaatctagcgctcactgtggctgcatttgttattgcctttata
ttcagttggcgccttgcagctgttgttgctgcttctttgccccttcttattggagcttca
ataactgagcaactatttctcaagggcttcggaggagattatagtcgagcgtataaccgt
gcaacagctgtagcacgcgaagccatcgccaatattcgcacggttgcagcatttggtgct
gaagaaaagatctcaagtcaatttgcctttgaattaaacaaacccaataagcaggccctt
gtgagaggccatattgctggctttggctatggcatatcccagttctttgcattctgttcc
tatgcacttggcctttggtatgcatcaactcttatcaaacacaaacactcaaactttggg
gacatcatgaaatctttcatggttttgataatcacatcattagcaatagcagaaactctg
gctcttacacctgatattgtaaaaggctctcaagcattaggatcagtcttcaatattctc
catcggagaaccgccatagattctgacaatcgatccgccgagatggtaactaacatcagg
ggcgacattgaattcagaaacgtgagttttaagtaccctgcaagaccagatatcacaatc
tttgaggatttgaatctaagggtatctgcaggcaagagtctagctgttgtcggtcgaagt
gggtcaggaaagagcacggtgatagcattggtgatgagattctacaaccccatgtcggga
actatctctatcgatgggcgtgacattacaagcttaaacttgagatcattaaggatgaaa
attgggttggttcaacaagaaccagctttgttttccacaacagtacatgagaacatcaag
tatgggaatcaggaggcatcagaaattgaagtaatgaaagcagctaaggcagctaacgct
catggcttcatcagccgaatgccgaatggctatgcaacgcacgttggcgaccgaggagtg
cagctctctggagggcagaagcagagggtggcaattgctagagcaatactgaaagagcct
tccattcttctgttggatgaagcaacaagtgcattggatgcagcctctgagaagcaggtg
caggaggctcttgacaggctaatggaaggccggacaacaattctcgtcgcccaccggctt
acaaccatccgcaatgccaacagaatcgccgtgctcaagagtggcagagtggttgagatt
ggcagccatgatagcttactgaagaaccccaacagtatctataaacagttggtgaactta
cagcaggaaacgagtgtgcaatcgcttgagtag

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