KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111796936
Entry
111796936         CDS       T05351                                 
Name
(RefSeq) splicing factor 3B subunit 4-like isoform X1
  KO
K12831  splicing factor 3B subunit 4
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111796936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111796936
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111796936
 Complex B
    111796936
 Complex C
   U2 SnRNP specific factors
    111796936
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 111796936
NCBI-ProteinID: XP_023535522
LinkDB
Position
LG06:complement(9822948..9828805)
AA seq 177 aa
MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENE
DITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNISHKSRSHIVSDYSNETSQYSN
RLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEYSQRYSRTTLDSFYQT
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtccggaagatcatcaaatcgctgcaccctttacgtaggtaatttagatgaaagggta
agcgacaaggttctttatgacattctaatccaagctgggcgggtagtagacttgcacatt
cctcgggacaaggaatctggaaaacccaagggttttgcttttgcagaatatgaaaatgag
gacattaccaactatgctattaagcttttctctggtctcgtgactcttcataatcgtacc
ctgaagtttgcagtatctgggcaagacaagccttcacctagttcatcatcaaatatatct
cataaatcgaggtcacatattgtttcagattactccaatgaaacatctcagtattcgaat
cgcttgtcaacgtcgtgcaggttttcagcgtaccctgagaaccatcgagaagctcttctt
caccctggtttagttaaccaatataatgggtatggatttcatttggacaactataataac
gagtacagtcagcgatattctaggacaactttggatagcttttaccaaacttaa

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