Cucurbita pepo subsp. pepo (vegetable marrow): 111797089
Help
Entry
111797089 CDS
T05351
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111797089
03012 Translation factors [BR:
cpep03012
]
111797089
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111797089
Translation factors [BR:
cpep03012
]
Eukaryotic type
Initiation factors
eIF-3
111797089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
ANAPC4_WD40
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
111797089
NCBI-ProteinID:
XP_023535753
LinkDB
All DBs
Position
LG06:7499257..7503886
Genome browser
AA seq
719 aa
AA seq
DB search
MADVMLIKDIEETADRLGIDLSQVDLDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGN
IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDPTTQKTLGYCFIEYGTPQ
EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEINPYTPGENLQQWLTDEK
ARDQFVIRSGSDTEVFWNDARHLKPEPVYKRPFWTESFVQWSSLGTYLATIHRQGAAVWG
GASTFNRLMRFAHQQVKLIDFSPGEKYLVTYSSHEPSNPRDANRIVINIFDVRTGKVMRD
FKGSPDDFSTGGTGGVAGLSWPVFRWGGGKEDKYFARIGKNVISVYETETFSLIDKKSLK
VENVMDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQS
NGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFA
VIHGDNPRPDISFYSMRSTHNSGRVSKLTTLKGKQANALFWSPAGRFILLAGLKGFNGQL
EFYNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRILK
DHFFQFAWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMLLSEQEREKRRMLKEE
WEKWLNEWKRLHEEEKLLRQKLRDGEASDEEEEYEAKEVEVEEILDVTEDVLSDDFDQE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgatgctgattaaagatattgaggaaacggctgatcggcttgggatagat
ctctcccaagttgatcttgatgccattcgtctccctcccggcgaggatttcggaatcatt
agtgatgatgaagaggttctacaagaggagagtcttgagtttgattctgggtttggaaac
attatagttgttgacaatcttccggttgttcctccggagaagtttgagaagctcgaaggt
gttgttcgtaaaatttttggacagattggagttattaaggatgatggtctgtggatgcct
gttgatcctactacacaaaaaactttagggtactgctttattgagtatggcactccacag
gaggcggagcttgccaaagagaagactgatgggtacaagctggatagagcacatattttc
actgttaacatgtttgaggactttgatagatttatgaaagtcccagatgagtgggctcct
cctgaaatcaacccatatactcctggggagaatcttcaacagtggcttaccgatgaaaaa
gcacgggatcagtttgttattcgttctggttctgacactgaggttttctggaatgatgct
agacatttgaagcctgagccagtctacaagcgtccattctggaccgagagttttgtgcag
tggtcctcattggggacttacctagcgacaattcaccgacagggtgctgcagtttggggt
ggagcaagtacctttaatcgtctgatgcgctttgcccatcaacaggttaagttaattgat
ttttctcctggcgaaaaatatctggtaacttacagcagccatgagcccagcaatcctcgt
gatgcaaataggatcgtgatcaatatttttgatgtgagaactggaaaggtaatgagagat
ttcaagggaagtcctgatgatttttccactggaggaactggtggtgttgccggcttatct
tggcctgtttttaggtggggtggtgggaaagaagataaatactttgccaggattgggaag
aatgtgatttcagtctatgaaaccgagactttctctcttatcgacaaaaagtctttgaag
gtcgaaaatgttatggatttttgctggtcccctacagatcccattattgcactgtttgtt
cctgagctaggtggtgggaaccaaccggctagggtgagtcttgtccaaatcccgagcaag
gaggagttgagacagaaaaatcttttcagtgttagcgattgcaaaatgtactggcaaagc
aatggggattatcttgctgtcaaggttgatagatatacgaagacaaagaaaagcacgtac
acagggttcgagcttttccgcataaaagagcgggatattcctattgaagtgttggagctt
gagaataagaacgataagatcattgcatttgcctgggagccaaaggggcataggtttgca
gtcattcatggtgacaacccgaggccagatattagcttttactcgatgcgaagcactcac
aacagtggccgagtgtcgaaacttacaactctcaaaggcaagcaggccaatgctcttttc
tggtcacctgctggaagattcattcttctagctggcttgaaaggtttcaatgggcagttg
gagttctacaacgtcgatgaactggagacgatggcaactgcagagcatttcatggctact
gatattgaatgggatcctactggaaggtacgttgcaactgctgtaacttcagtccacgag
atggaaaacggtttcaacatatggtccttcaatggaaagctcctctatcgaatcttgaag
gatcatttctttcagttcgcatggcgaccaaggccaccatccttcttgaccccggagaaa
gaggaagagatagcaaagaacttgaagaagtacagtaagaagtacgaggctgaagatcag
gacgtatctatgctactgagcgagcaggagcgcgagaaacggagaatgctgaaggaggag
tgggagaagtggttgaatgaatggaagagattgcacgaagaagagaagttgttgcgacag
aagcttcgggatggtgaagccagcgatgaagaagaggaatacgaagccaaagaggtcgaa
gtcgaagagattttggacgtgacggaggacgttttgtcggatgattttgatcaggaatga
DBGET
integrated database retrieval system
