Cucurbita pepo subsp. pepo (vegetable marrow): 111797164
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Entry
111797164 CDS
T05351
Name
(RefSeq) transport inhibitor response 1-like protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
LRR_6
F-box
Motif
Other DBs
NCBI-GeneID:
111797164
NCBI-ProteinID:
XP_023535864
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Position
LG06:complement(2585084..2588399)
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AA seq
629 aa
AA seq
DB search
MRVDQSEEMSEDEDRSLPSDLAGDAIAESVSKARNCVGCSGDVAGSDSGSVENILHNVLE
NVLHFLTSRRDRNAASLVCKSWYRVEALTRSELFIGNCYAVSPRRVTSRFNRVRSVMIKG
KPRFADFNLMPPNWGAHFSPWVAAMAKSYPWLETVYLKRMSVTDDDLALLADSFPGFKEL
VLFCCEGFGTSGIAVVASRCMHLRVLDLIESDVTDDEVDWISCFPEKETCLESLMFDCIE
CPINFEALERLVSRSPSLKKLGVNRYVSIAQLYRLMIRAPHLTHLGTGSFSTSEAVVHGE
SEPDYASAFAACKSLVCLSGFKDILPDYLPCIYPVCANLTTLNLSFANITAEQLKPVISH
CHKLQTFWALDSICDEGLQAVASTCKELRELRVFPVDVREDGEGPISEVGFQAISEGCRK
LQYILYFCQRMTNAAVVAMSQNCQDLVVFRLCIMGRHQPDHQTGEPMDQGFGAIVINCKK
LTRLAISGLLTDRAFSYIGKYGKLVRTLSVAFAGNSDLGLKYVLEGCLRLQKLEIRDSPF
GDGALRSGLHHYYNMRFLWMSACKLSRQGCQEVARAMPHLVVEVMRNENDDETESSVEVE
GMENHVQVLYMYRSLEGPRDDAPKFVDIL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagagtggaccaatctgaagaaatgtctgaagacgaagatcgatctttaccttcagat
ctagccggcgatgccatagccgaatctgtaagtaaagctcgtaattgcgtagggtgttct
ggtgatgtagctggttctgattctggttctgttgagaatatacttcataatgttcttgag
aacgtgcttcacttccttacttctcggcgtgaccggaacgcggcgtcgctcgtctgtaag
tcgtggtatcgcgttgaggcactcactcgatctgaactcttcattggaaattgctatgct
gtttcacctcgccgagtcacgtcgcggtttaatcgagttcggtcagttatgatcaaaggg
aagcctcggtttgcagatttcaacctgatgccgcccaattggggggctcacttctcccca
tgggtggcggccatggccaaatcatatccttggctcgagactgtctatttgaagcgcatg
tctgtgactgacgacgatctcgccctgctcgctgactcttttcctggctttaaggagctt
gtgttgttttgctgcgaaggatttggcactagtggtattgctgttgttgcctccagatgc
atgcaccttcgagtacttgatctgattgaatctgacgtaacagacgatgaagtggattgg
atatcttgtttcccggagaaggaaacttgtcttgaatctctgatgtttgattgtatagag
tgccctattaattttgaggcactggagaggttggtgagtagatccccatccttgaaaaaa
cttggggtgaatcgttacgtttccattgctcagctataccgcttgatgattcgggctcct
catctaacacatcttggaactggttcgttcagtacttcagaggctgtggttcatggggaa
tcagagcctgattatgcctctgcttttgctgcttgcaaatccttggtttgtctctctgga
ttcaaggacattttacctgattacctaccttgtatctatccagtttgtgctaatctcacc
actctgaacttgagctttgcaaatataactgctgaacaactcaaaccagttataagccac
tgccacaagctccagactttctgggctcttgattcgatatgcgatgaaggacttcaggct
gttgcttcaacgtgcaaggaattgcgagaacttcgggtttttcctgttgatgtgcgagaa
gatggtgaaggccccatttctgaagtgggcttccaggcgatatccgagggttgcaggaaa
ttgcaatatatcctctacttttgccagagaatgaccaatgcagctgtggtagctatgtca
cagaactgccaagatctcgtggtgtttagactatgtattatgggacgacaccagccagac
catcaaactggagaacccatggatcaaggatttggtgcaatcgttatcaactgtaagaag
cttactaggcttgctatatctggattattgactgatcgtgctttcagctacattgggaag
tatggaaaactggtacgcaccctatcagttgcttttgctggaaatagtgatttgggattg
aaatatgtgcttgagggttgtcttagattgcaaaaacttgagattagagatagcccattt
ggcgatggagccttgcgatctggtttacatcattattataatatgagattcctctggatg
tcagcttgtaaactgtctcgccaaggctgccaagaggttgccagagcgatgcctcactta
gttgttgaggtgatgaggaatgaaaatgacgacgaaactgaaagcagtgtcgaggtggag
ggtatggagaaccatgttcaggtgttatacatgtatagatctcttgaggggccaagggat
gatgctccaaagtttgttgacatcctatag
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