Cucurbita pepo subsp. pepo (vegetable marrow): 111797317
Help
Entry
111797317 CDS
T05351
Name
(RefSeq) auxin response factor 5-like isoform X1
KO
K14486
auxin response factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111797317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
SIS_2
Motif
Other DBs
NCBI-GeneID:
111797317
NCBI-ProteinID:
XP_023536063
LinkDB
All DBs
Position
LG06:395015..399777
Genome browser
AA seq
910 aa
AA seq
DB search
MSSVEDKLKTPMGLVNNTPQTNLLDEMKLLKQMQDQTGARKAINSELWHACAGPLVSLPH
VGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVQSVTLHADKDSDEIYAQM
SLQPVNSEKDVFLVPDFGLRPSKHPNEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDY
TMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFIRDEK
SQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVI
PLAKYRKCVFGTQLSAGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVE
WDEPGCCDKQNRVSSWEIETPESLFIFPSLTSGLKRPLHGGFLAGETDWESLVKRPMLRV
PENIRGDLSYAAPNLCSEPLMKMLLRPQLVSLHGATLHQDSANNLVKIQDMKDMQPETNS
KMKQPIPTETASPGNQNPDPINPNSSPKESLPGKVHTSAATESEPPTGADDVSTNQSNTL
PPVGDCVGGKLSAKEVNMQTLVNQLSFMNQNQIPMQSWPLQPQLESLIQHPQPIDMPQPE
FTLDGDGCLINPSCLPLPGVMRSPGNLSMLALQESSTVFPEALNFPLPSTGQDMWDPLNN
IRFSSNLNCMGNANVMRAVSDESNNQSGIYSCSNLEISNGGNTLVDPAVSSTILDDYCAL
KDADFPHPSDCLVGNFSSSQDVQSQITSAASLGDSQAFSRQDFHDNSGGTSSCNVDFDEG
SLLHNGSWNQVVPPMRTYTKVQKAGSVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPR
GSGWKLVYVDYENDVLLIGDDPWEEFVSCVRCIRILSPSEVKQMSEEGMKLLNSAMMQGI
NCSMPEGGRG
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtggaagacaagctcaagacaccaatgggtttggttaacaacacccctcag
actaaccttctcgacgagatgaagttgctgaaacaaatgcaagatcaaacaggggcccgg
aaggctattaactccgagctctggcacgcgtgtgctggtccgcttgtttccttgccccat
gtggggagtcttgtttattactttcctcagggacatagtgaacaggtggcggtttctacc
aagagaacagcaacctcacagattccaaattatcctaatcttccctctcagttgatgtgc
caagttcaaagtgttaccttacatgctgataaagattcagatgaaatctacgctcaaatg
agccttcaaccggtgaactctgaaaaagatgtcttccttgttccggactttggactacgg
ccgagtaaacacccaaatgaattcttctgcaaaacattgactgccagtgataccagcaca
catggtgggttctcagtgccacgcagggctgctgaaaagctttttccgccattggattac
acaatgcaaccaccaactcaggagctcgttgttcgagacttgcatgacaatacctggact
tttcgccacatctatcgcgggcagccgaagcgacaccttctcacaactgggtggagtcta
tttgttggagcaaagaggcttagagcaggcgattctgttcttttcataagggatgaaaag
tcccagttgctgattggagtgaggcgtgctaaccggcaacaaacaacattgccatcatcg
gtgctatccgccgacagtatgcatataggagttcttgctgctgcagctcatgccgctgct
aatcgcagtccattcacaatcttttacaatcccagggcatgtccttcagagtttgttatt
cccttagccaaatatcggaaatgtgtattcggaactcagctttctgcgggtatgaggttc
gggatgatgtttgaaacagaggagtcgggaaaacgccgatatatgggtacaattgttggg
attagcgatttagatccacttaggtggccaggttccaagtggcgaaatcttcaagtggaa
tgggatgagccagggtgctgcgacaagcaaaacagggttagttcatgggaaatagaaact
ccagaaagtctcttcatttttccttctctgacttcgggtcttaaacgtccattacacggc
ggatttttggcaggagaaactgattgggaaagtctggtgaagagaccaatgcttcgtgtt
cctgaaaatatacgaggggatctttcatatgctgcgccaaatctatgctctgaaccactg
atgaagatgctactgaggcctcaactcgttagccttcacggagccaccttacaccaggat
tcagctaacaatttagtgaagatacaggacatgaaggacatgcagccagaaaccaattct
aaaatgaagcagcctattccgacagaaactgcatctcccgggaatcaaaatcctgatccc
ataaacccaaattcatcaccaaaagaaagtttaccaggaaaagtgcacacttcagcggct
actgaaagtgaacctccaactggagctgatgatgtttcaaccaatcagtccaatacattg
cccccggtcggagattgtgtggggggaaaactcagtgctaaagaagtgaatatgcagacc
cttgtgaaccagctttcatttatgaaccagaatcagatccccatgcagtcatggccgttg
cagcctcagcttgaatcactaatccaacacccacaaccaattgacatgcctcagcctgaa
tttacgctggatggtgatggatgtttgattaacccatcctgtctgcctcttcctggagta
atgagatcacccgggaacctttccatgttggcattgcaagaatcctcaacagtcttccct
gaggctcttaattttcccttaccctcaactgggcaagacatgtgggatcctcttaataat
ataagattctcttctaacctgaattgtatgggtaatgcaaatgttatgagagccgtttca
gacgagagcaacaaccaaagtgggatatatagctgttctaaccttgaaatcagtaatggt
ggaaatactttggttgatcctgctgtttcgagtactattcttgatgattattgcgcattg
aaagatgctgacttcccacatccttcagattgcttggttggaaacttcagctcaagccaa
gatgttcagtctcagattacctctgctgctagtcttggagattctcaggctttctccagg
caagacttccatgataattcaggtggtacttcctcttgcaatgtggattttgatgagggc
agtcttctgcataacggctcctggaatcaagtcgtaccgcccatgagaacttacaccaag
gtccagaaggcaggatctgttgggaggtctattgatgtcactagttttaagaactacgac
gaactgtgctccgctatcgaatgcatgtttggacttgaagggctgcttaatgacccgaga
ggctcaggatggaaactggtttatgtcgattatgagaatgacgtcttgcttattggcgat
gatccatgggaggaatttgtgagctgtgtacggtgcatcagaatcttgtcgccctcagaa
gttaagcaaatgagcgaagagggaatgaagcttctcaacagtgctatgatgcaaggcatc
aattgctccatgccagaaggtggccgaggttaa
DBGET
integrated database retrieval system
