KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111797324
Entry
111797324         CDS       T05351                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144  Endocytosis
cpep04145  Phagosome
cpep04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111797324
   04145 Phagosome
    111797324
   04148 Efferocytosis
    111797324
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111797324
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111797324
   04031 GTP-binding proteins [BR:cpep04031]
    111797324
Membrane trafficking [BR:cpep04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    111797324
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111797324
  Exosomal proteins of other body fluids (saliva and urine)
   111797324
  Exosomal proteins of colorectal cancer cells
   111797324
  Exosomal proteins of bladder cancer cells
   111797324
GTP-binding proteins [BR:cpep04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    111797324
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU ATP_bind_1 cobW RsgA_GTPase AAA_16 Septin nSTAND3 AAA_7 AAA_22 AAA_24 DAP3 NACHT PduV-EutP NTPase_1 nSTAND1 Sigma54_activat NB-ARC ATPase_2 AAA_5 MCM
Other DBs
NCBI-GeneID: 111797324
NCBI-ProteinID: XP_023536071
LinkDB
Position
LG06:6470439..6475843
AA seq 205 aa
MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPF
ILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAREDYNVDAAFLCIAKTALANE
HEQDIYFQGIPETVVETEQRGGCAC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtctctccgtagacggactttgctcaaggtcatcgttcttggtgacagtggggttggc
aagacgtcgttgatgaaccaatacgtgcacaagaagttcagtcagcaatataaagctaca
attggtgcagattttgtcaccaaggaacttcaaattgacgacaggcttgtcacacttcaa
atatgggatacagccggacaagaaagatttcaaagtcttggagttgctttctatagaggg
gctgattgctgtgttctagtctatgatgttaacgtgatgaagtcatttgacacactcgac
aattggcacgatgagtttcttagacaggcaaatccacctgacccaagaacgttcccattt
atattgcttggaaataagattgacattgatggtgggaatagtcgagtggtttctgagaag
aaagctagggaatggtgtgcatcaaaagaaaatattccgtactttgaaacatcagctaga
gaagactacaacgtcgatgctgcatttttgtgcattgccaagactgcattagccaatgaa
catgagcaggatatatatttccaaggaatcccggaaacggtcgtggagactgagcaaaga
ggtggttgcgcgtgctga

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