Cucurbita pepo subsp. pepo (vegetable marrow): 111797351
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Entry
111797351 CDS
T05351
Name
(RefSeq) FHA domain-containing protein DDL
KO
K13108
smad nuclear-interacting protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111797351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111797351
Spliceosome [BR:
cpep03041
]
Complex B
Other components
RES complex
111797351
Complex C
111797351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
Motif
Other DBs
NCBI-GeneID:
111797351
NCBI-ProteinID:
XP_023536107
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All DBs
Position
LG06:complement(4766137..4771102)
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AA seq
355 aa
AA seq
DB search
MGRNVSDDSESPIRVRRSSPRRSPSRRGRSPTRHKSSRNSSSPVRDKHSSHAKSPKHKRS
SSPRTRSPSPRTKRLRRAAERAPEKSSDRDSERNRGRGNDKEGHRERVSDRELGSERKER
SSRQDVKDGKSSRSRHGNSSSPSERHHRSRHRSPSPQPGSDAKNHDEGRNSRRAESRSDD
DDSVAKMKATEEALEAKQKDKPSFELSGKLAAETNRVRGITLLFNEPPDARKPDVRWRLY
VFKAGEVLNEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKEKPDGTMS
KQVRPYLMDLGSTNKTYINESAIEPQRYYELFEKDTLKFGNSSREYVLLHEKSAG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaaatgtatcagatgattcagaatctccaattagggtgaggcggtcttctcct
agaaggagtccatcccgcagaggaaggtcacctacacggcacaagagctcccgtaatagc
agttctccagtaagagacaaacattctagtcatgctaaatctccaaagcataagaggtca
agttctccacgaactcgatctccttctccaaggacaaaacggttgaggagagctgctgaa
agagctccagagaaatcaagtgatagagattctgaaaggaaccgagggaggggtaatgat
aaagaaggtcatcgggaaagagtctctgacagggaattagggagcgagagaaaggagagg
agttctagacaggatgttaaggatggaaaatcttccaggtccagacatgggaattcttct
tctccatcagaacgccaccataggagccgccataggtccccatcgccccagcctggctct
gatgccaaaaatcatgatgaggggagaaattcaagaagggctgaaagccggagtgatgac
gatgattcagtggcaaagatgaaggctacggaggaagccttagaagctaagcagaaggac
aaaccttcttttgagctatccggaaagcttgcagcagaaactaatagagtaagaggtatt
acgttgctgtttaatgaacctccagatgctagaaaacctgatgtaagatggcggctgtat
gtttttaaggctggagaagtgctgaatgaacctctttacatacatcgtcaaagttgttac
ctttttgggagagaaagaagagtcgcggacatacctactgatcatccgtcctgcagcaag
caacatgctgtcatccagtttcggcaagtagaaaaggagaagcctgatggtacaatgtcg
aagcaagtaaggccttatttgatggatctaggaagcacaaataagacttatatcaacgaa
tctgcaattgaacctcaacgttactatgaactttttgaaaaagacactctgaagtttggc
aatagtagtcgagaatatgtattgttgcacgagaagtcagctggatga
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