Cucurbita pepo subsp. pepo (vegetable marrow): 111797497
Help
Entry
111797497 CDS
T05351
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like isoform X1
KO
K03252
translation initiation factor 3 subunit C
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cpep03012
]
111797497
Translation factors [BR:
cpep03012
]
Eukaryotic type
Initiation factors
eIF-3
111797497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
111797497
NCBI-ProteinID:
XP_023536279
LinkDB
All DBs
Position
LG01:2788670..2793527
Genome browser
AA seq
953 aa
AA seq
DB search
MASRFWSQGGGSGSDSEAEKSDYDEEIDDLQADPSSQANRSRYLQGNASDSDDSDKDRRT
VRSAKDKRFEEMSASVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVMESEKVPTLYIK
ALVMLEDFLNQAMANKEAKKKMSTSNAKALNSMKQKLKKNNRQYEELITKCRENPEVEEE
KDDEMETEDDDDDDDDSVIQEDPTKILSGSEDEEDDEEDQEEPDGPWVKQLSKRDKLMDK
QFMKDPREITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTRVAKTPAQKLEILFSVI
SAQFDVNPGLSGHMPISVWKKCVQNMLSIIDILMQNSNIVVDDMVEPDENESQKPADYEG
TIRVWGNLVAFVERIDTEFFKSLQCIDPHTREYVERLRDEPMFMVLAQNVQEYLERTGDY
KAASKVALRRVELIYYKPQEVYDAMIKLAELSEDGASGDASEEAKVAEEIRGPAAFIVTP
EVVPRVPTFPESSRAFMDILVTLIYQYGDERTKARAMLCDIYHHALFDEFYISSDLLLMS
HLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLISEAHGCLSELYSGGRVRELLAQGVSQ
SRYYEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNLAGSVHDAKRKVISK
NFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAFDVIASLDVWKLLRNRDHVL
EMVKVKIKVEALRTYLLTYSSSYDSLSLDQLTRMFDIAEGQTHSIVSKMMINEELHASWD
QPSGCVIFHDVALTRLQGLAFQLADKLSILAETNERAVEARIGGVDLPMRRRDNQEYAAG
AVGGGSRWPDNQGRQGGGSSRAGYSNGGRGEGGGGGSSRAGYSNGGRGEGGGGGYGRDRT
GQSRGGNAGGYQSTRYQDAAYRSGRSAYQSGSVRGSQMGASARMVSLNKGVIA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgtttctggtcccagggtggtggtagtggtagtgattctgaagcggagaag
agtgactatgatgaagagattgacgacctacaagctgatcctagctcccaagcgaataga
agcagatatctgcaagggaatgccagtgacagtgacgattctgataaagatagacgtact
gtcaggtcggctaaagataagcgttttgaggagatgtctgcttctgtggatcagatgaaa
aatgcaatgaagatcaatgactgggtaagcttgcaggagagttttgataaaataaataag
cagcttgagaaggtcatgcgtgttatggagtctgagaaggtgccaactctttatattaaa
gcacttgtgatgttggaggacttcctaaatcaagccatggctaataaggaagctaagaag
aaaatgagcactagcaatgctaaggccttgaattcaatgaaacagaagctaaagaagaac
aataggcaatatgaagagttaattacaaagtgtagggagaatcctgaggttgaggaagaa
aaggatgatgagatggaaacggaggatgatgatgatgatgatgacgattctgtaattcag
gaggaccctactaaaattttgtcaggatcagaagatgaagaggatgacgaagaagaccaa
gaggagcccgatggcccttgggtgaaacagttgagcaaacgggataagctcatggataag
cagtttatgaaggatccgagagagatcacatgggacactgttaacaagaaatttaaggag
gttgtggctgcccggggtaggaagggaactggaagatttgagcaggttgagcagcttacg
ttcttaacaagagttgctaagacccctgcacagaagcttgagattttgttcagtgttata
tctgctcaatttgatgttaatccaggtctcagtgggcacatgcctatcagtgtgtggaag
aagtgtgtgcaaaatatgctttctattattgacattcttatgcagaattctaacattgtg
gtggatgatatggttgaacctgatgagaacgagagccagaagccagcagactatgagggc
acaattcgtgtgtggggaaacttggttgcttttgttgagaggattgacactgagtttttt
aagagcttgcagtgtattgatccacatacacgtgagtatgttgaaagactcagagatgag
ccaatgtttatggttcttgctcagaatgtccaagaatatttggaacgaactggggattac
aaagcagcttcaaaagttgccttgagacgtgtcgagctgatctattacaaaccacaagag
gtttatgatgccatgataaagctcgcagagctgtccgaagatggagctagtggagatgct
agtgaggaggctaaggttgcagaagagattaggggccctgctgcatttattgtcacgccg
gaggttgtacctcgtgtacccacctttccagagagtagtagagcttttatggacattctg
gtgacccttatataccaatatggagacgagcgcactaaagcacgagctatgctctgtgat
atttaccaccatgcgctctttgatgaattttatatttctagtgacttgttactgatgagt
cacttacaggatagtattcaacacttggacatttcaacacagatccttttcaatagggca
atggctcaacttggtctatgtggatttcgggttggcctgattagtgaagcacatggctgc
ctttcagaattatattctggtgggagggtgagggaattgcttgcacaaggtgtctcacaa
agccgatattatgaaaagactccagagcaggaaaggcttgaaaggaggaggcagatgcca
taccatatgcacataaatcttgagctcctggaggctgtgcatttgatatgtgctatgctg
ctggaagtacccaacctggcaggcagtgttcatgatgcaaagcgcaaggttattagcaag
aactttagaaggttactggaggtgagtgagagacaaacgttcactggtcctcccgagaat
gtcagagatcatgtaatggctgctaccagagcccttcgcaagggcgatttccaaaaagct
tttgatgtcattgcatctctagatgtatggaagctacttagaaatcgtgatcatgtgctg
gaaatggttaaagtaaagatcaaggtggaagctctgaggacgtaccttctcacgtactct
tcctcatatgattctctgagtttggaccagctgactcgaatgttcgacatcgcagagggt
caaacacacagtattgttagcaagatgatgataaatgaggagctccatgcaagttgggat
cagccaagtggatgtgtcatcttccatgatgttgcgctcacccggttacagggcttggcg
ttccagttggcagataagctgtctatccttgctgaaactaatgagagggcagtggaggca
agaataggaggagtagatttaccgatgaggcgaagagacaaccaagagtatgctgccgga
gctgtaggtggtggtagcaggtggccagacaatcaaggaaggcaaggtggcggtagttcg
cgtgcagggtatagcaatggagggcgtggcgaaggtgggggtggcggtagttcgcgtgca
gggtatagcaatggagggcgtggcgaaggtgggggtggcggatatggtagagaccggacg
ggtcagtcacgaggaggcaatgcaggaggatatcaaagcacccgttatcaagacgctgca
tatagatcggggaggagcgcttatcagtctggttctgtccgaggatcccagatgggtgct
tcagctcgcatggtcagtctcaacaaaggggttattgcttaa
DBGET
integrated database retrieval system
