Cucurbita pepo subsp. pepo (vegetable marrow): 111797501
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Entry
111797501 CDS
T05351
Name
(RefSeq) RING-H2 finger protein ATL11-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111797501
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111797501
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111797501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-Nse
Tmpp129
Prok-RING_1
zinc_ribbon_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
111797501
NCBI-ProteinID:
XP_023536280
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All DBs
Position
LG06:2558347..2559698
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AA seq
372 aa
AA seq
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MIPVMVIRKRNHGVACRLLLLLLLHAAAAAQETGAGTIPVSSEPEISKNMAIAFVALISA
FFVLGIVSVYTRRCRERRFGRGLGIGIEGRDGGGSGGGGGMPWRPARGLDPAFIATFPTF
VYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVCRA
NLCPKPGDVTLSMINFDPAGSERTGSVPSPLPSPSPNHVSIPVVDDLRAGEEARVEANVT
NPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTRSWA
ELPREQSLRRGYRGGIGENGRWRNFLHRTFSVPAQVVGRVAGTGRSPVHEDRGERSFARL
TPSGIGPSTVAD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtgatggtaatcaggaagaggaatcacggtgttgcttgccgattattgttg
cttctgttgctgcacgccgccgccgccgcgcaggagacaggagctggaacgataccggta
tcgtcggagccggagatcagtaaaaatatggcgatcgcatttgttgcgttgatatccgcc
ttcttcgtcctcggcatcgtctctgtctacacgcgccgctgcagagagcggcgatttgga
agaggtttaggaattggaatcgaggggagagatggcggtggcagtggcggcggcggaggc
atgccgtggaggccggcgcgtggattggatccggcgttcatcgcgacatttccgactttt
gtgtactcgacggtgaaagggctgaaaatcgggaaaagctcactggaatgcgccgtttgc
ttgaatgaatttgaaaatagtgatcggctgcgtttgattccgaagtgtagtcatgttttt
cactctgtttgtgttgatgcttggttagtttcgcactcgacttgccctgtttgcagagct
aatctctgtcctaaacccggcgacgtaacattgtcgatgattaacttcgatcccgccggc
tcagaacgaaccggtagcgtaccgtctcctttgccatctccgtcgccgaaccatgtatcc
attccggtggttgacgatctccgtgccggagaagaagcgagagtagaggcaaatgtgacg
aatccgagtccggtgccgaccaggagcaccccaacgcggtcgaggtcgttgggatggcgg
ttgagtggaatatttcagcggtctaactcgaccgggcatgatcgattcactttgcggttg
ccggatgcggtacggagtcagctgatgaactcgacgttgaaccgaacccgaagctgggcg
gagttgccgagagagcagagtttgcgacggggatatcggggtggaatcggagaaaatggc
cggtggaggaatttccttcaccggacgttttcggtgccggcgcaggtcgtcggaagggtt
gccggaactggccggtctccggtgcatgaggaccgcggtgagaggtcgtttgcacggctg
acgccgagtggaattggtccaagtacggtggcggattag
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