Cucurbita pepo subsp. pepo (vegetable marrow): 111797538
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Entry
111797538 CDS
T05351
Name
(RefSeq) floral homeotic protein PMADS 2-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111797538
Transcription factors [BR:
cpep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
111797538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
APG6_N
Prominin
Atg11_middle
Nsp1_C
SCPU
DUF5315
Motif
Other DBs
NCBI-GeneID:
111797538
NCBI-ProteinID:
XP_023536339
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Position
LG06:complement(3725590..3728552)
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AA seq
209 aa
AA seq
DB search
MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP
STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE
LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGVDNGY
NQRMRDFNSQMPFAFRVQPIQPNLQERNN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggggaaagattgaaatcaagaggattgagaactcaagcaacaggcaagtgacc
tattcaaagagaagaaatggtatcatcaagaaggccaaagagatcactgttctttgtgat
gctcaagtttctcttgtggtgtttgctagctctggcaaaatgcatgagtattgtagccct
tctacaccgttgattgatatcttggataagtatcataagcaatcggggaagaggctgtgg
gatgctaaacatgagaatttaagcaatgaaatggatagggttaagaaagaaaatgacaac
atgcagattgagctcaggcgtttgagaggagaagatataacatctttgaactacaaggag
ctaatggctcttgaagaagcccttgaaaatggccttactggtgttcgtgagaagcagtcg
gagctcatgaagatgatgaggacaaatgaaagaatgatggaagaagagaacaagcgcctc
aattatgagctgtaccaaaaggagatggtagcaatgggagatggtgtggataatggatat
aatcaaaggatgagagatttcaattctcaaatgccctttgcgttcagagtgcagcccatt
cagccaaacctacaagaaaggaacaattaa
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