Cucurbita pepo subsp. pepo (vegetable marrow): 111797595
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Entry
111797595 CDS
T05351
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111797595
Enzymes [BR:
cpep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
111797595
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111797595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
111797595
NCBI-ProteinID:
XP_023536416
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All DBs
Position
LG06:complement(5316516..5321894)
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AA seq
609 aa
AA seq
DB search
MAAAKFNKKKAVKRDDLPLKGKKKDELFTRKRSQEEDDDSEVSDGLDMEEVENGVLDGDE
EGSESGSEVSSDGDDPLADDFLQGSDDEENGSGSDSGSDSDEDIENKSRIIDEERAREEK
DAADEMQLNIKEESDEFRLPTKEELEEEALGPPDLSNLQRRIREIVRVLTNFKALRQEGA
TRKDYVEQLKKDLCSYYGYNEFLIGVLVEMFPVVELMELIEAFEKPRPICLRTNTLKTRR
RDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQGASSFLPVMALA
PQEKERIIDMAAAPGGKTTYIAALMKNSGLIFANEMKAPRLKSLTANLQRMGVTNTVVCN
YDGKELPKVLGKNTADRVLLDAPCSGSGVVSKDESVKTSKSLEEIQKCAQLQKQLILAAI
DMVDSNSKSGGYVVYSTCSIMVDENEAVVDYALKKRDVKLVPCGLDFGRPGFIRFREKRF
HPSLEKTRRFYPHVHNMDGFFVAKLQKMSNKIPTAQSSELLEETVEEDSESEKSGNEKDD
GECLHPKVSDERKRKKVSKNHDNENGEEESKPAVEKRKKRKFPSREEISKAREEKRQALR
EKKTGSKKE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgaagttcaacaagaagaaggctgtgaaacgggacgaccttccattgaaa
gggaagaagaaggacgagctcttcacacgtaaacgttctcaggaggaagatgatgattct
gaggtttcggatggtctggatatggaagaagtagagaatggagtgcttgatggtgatgaa
gaaggatcggagtctggttctgaagtttcttctgatggtgatgatcctttggccgatgat
ttcctgcaaggaagtgacgacgaagagaatggttcaggctcggattcaggttctgattca
gatgaagacatcgaaaacaagtcgagaatcatcgatgaagagagggcgagggaagaaaaa
gatgctgcggatgaaatgcagctcaatattaaagaagaatccgatgagttcagattacct
accaaggaggaacttgaagaagaggcgcttggacctcccgacctttcaaatttacaacgg
cgtataagagagattgttcgagttcttacgaatttcaaggctttgaggcaggagggagca
acccgtaaggattatgttgaacaacttaagaaagatctttgttcatattatgggtataac
gaatttcttattggggtgctagttgagatgtttccagttgttgagctaatggaacttatt
gaagcctttgaaaagcctagaccaatatgtttgcgtactaacaccttaaagacgagaagg
cgggatctggcagatgttctgattaacagaggtgttaacctagatcctttaagcaagtgg
tcaaaggttggacttgttgtatatgattcccaagtgccaatcggagcgactccggaatat
atggctggtttttacatgctacaaggtgcaagctcctttctgcctgtgatggcccttgct
cctcaggaaaaagaacgaatcattgacatggcggcagcacctggtggtaaaactacatac
atagcggcactaatgaaaaatagtggattaatatttgcaaatgagatgaaagcaccaaga
ctgaagtcactcactgcaaatttacagcggatgggtgtgacaaatactgttgtctgcaac
tatgatgggaaggagctcccgaaagtattaggcaagaacacggccgatagagttctgtta
gatgccccttgcagtggatctggagttgtatctaaggacgaatctgttaaaacctcaaaa
agcttggaagaaatccagaaatgtgctcagttgcaaaagcaacttatactcgctgcaatc
gacatggtcgattcaaattcaaaatctgggggatatgttgtgtactccacatgctccatc
atggttgatgagaacgaagcagttgttgactatgcacttaaaaagagggatgtgaaactt
gtgccatgtggccttgatttcggacgtcccgggtttattcggttcagggagaaacgtttt
cacccatctttagagaagacgagacgtttctacccccatgtccacaacatggatggattt
ttcgtggcaaagttgcagaaaatgagcaacaagattccaactgctcaatcttcagaatta
ttggaagagaccgtggaagaagatagcgagtcagagaagagcggaaatgaaaaggatgac
ggcgaatgtctccacccgaaagttagcgacgagagaaagaggaagaaggtttcgaaaaac
cacgacaatgaaaatggcgaagaagaatccaagcccgctgtcgaaaagaggaagaagaga
aaatttccttcaagagaggaaatctcaaaagctagggaggaaaaacgacaagctttaagg
gaaaagaaaactgggagcaagaaagagtaa
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