Cucurbita pepo subsp. pepo (vegetable marrow): 111797615
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Entry
111797615 CDS
T05351
Name
(RefSeq) probable DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111797615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111797615
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
111797615
DNA repair and recombination proteins [BR:
cpep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111797615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-GeneID:
111797615
NCBI-ProteinID:
XP_023536439
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Position
LG06:complement(536949..541022)
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AA seq
376 aa
AA seq
DB search
MGEHTQVQVQTQTQSQSQAQSQAQNTFHESSNSTTTIAQATVALSEVMNAPSQTSSPPSK
MPLRPRKIRKLSPDESDPNSSQVVAIPDGPKPIATSKSNKSKTAQQRAAFASAPVMLARS
LSCEGEVEVALRHLRNADPLLAPLIDLHQRPTFDSFQTPFLALTRSILYQQLAYKAGTSI
YTRFIALCGGEAGVLPETVLALSPQQLRQIGISGRKSSYLHDLARKYQNGILSDPAIVNM
DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLNVRKGVQLLYNLEELPRPSQM
DHLCEKWRPYRSVGSWYMWRFAEAKGASSSAAAIAAGASLQLQQQEHQPEHQHQQQPQLL
DPLNSILNLGACAWGQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcacacgcaagtgcaggttcagactcagacccaaagccaatctcaagcgcaa
tcgcaggctcagaacacgtttcatgaatcctccaactccacaaccactatcgcccaagct
actgtggcattaagcgaggtgatgaatgcgccatcgcaaacctcttctccgccatccaaa
atgcccttgcgtccgcggaagatccggaagctctcgcctgatgaatcggatccaaattcc
tctcaggttgttgccattccggatgggccgaaacctatagccaccagcaaatctaacaag
agcaagacggcccaacaacgcgccgcattcgcgtctgccccggtaatgcttgcccgatca
ctttcctgtgaaggcgaggtggaagtcgcgcttcggcatctccggaatgccgatccgctc
cttgcacctttgatcgaccttcatcaacgtcctaccttcgacagttttcaaaccccattc
cttgcccttactagaagtatcctttatcagcagctggcttacaaagctggcacctcaatc
tacactcgtttcatcgctctctgtggcggcgaggctggcgttcttcctgaaactgtactt
gccttgagccctcaacagctcaggcaaattggaatttcgggtcgtaaatctagttacctt
catgatcttgcgaggaagtatcaaaatgggattctttcagaccccgcaattgtaaatatg
gatgataaatcgcttttcacgatgcttacaatggtcaatggaattgggtcttggtctgtt
catatgttcatgattttctcgctgcacagaccagacgtgcttcctatcaatgatcttaat
gttcgcaaaggtgttcaacttctctacaatcttgaagagttgcctcgaccatcgcagatg
gatcacttatgcgagaagtggaggccgtatcgatcggttgggtcgtggtatatgtggagg
tttgctgaggcgaagggggcttcttcaagcgcagcagcaatagctgctggtgctagttta
caactgcagcaacaagagcaccagccggagcaccagcatcaacagcagccgcagcttctt
gacccacttaatagcattctcaatcttggggcctgtgcttgggggcagtga
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