Cucurbita pepo subsp. pepo (vegetable marrow): 111797664
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Entry
111797664 CDS
T05351
Name
(RefSeq) KH domain-containing protein At5g56140-like
KO
K14945
protein quaking
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111797664
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111797664
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
111797664
NCBI-ProteinID:
XP_023536507
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Position
LG06:5488580..5498447
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AA seq
298 aa
AA seq
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MASSAGGMYMAFSPSPSAPHSPHLPGLRSPSSVSAAAAALLEQEKYLSELLAERQKLGPF
LPVLPISYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMNGWPSRFQ
SEMSSLLQSSPAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRV
EASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQARE
ILEDLLKPMDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtctgcaggcgggatgtacatggctttctctccctctccctcggctcctcac
tctcctcatcttcctggtcttcgctccccgtcctctgtatctgcggctgcggctgctcta
ctcgagcaagagaagtatctgtctgagttattggcagagcgacagaaacttggtccattt
ctgcctgtgctgcctattagttatcgcttgctgaaccaagaaatattgcgtgtaactaca
ctattggggaaggcatcagttttaggtcaaagtgggcttgaacatgccagccccctggct
tctggaggaatattttcaaatggaggtgctgacatgaatggatggccatcacggtttcaa
tcagaaatgtcaagtttattacaatcctcaccagcacaaaattggctaagttcccaaggt
agttcatcaggtcttattgtgaagagaaccatcagagtggacgttcctgttgacaactat
cccaattataactttgttggccgcctccttggacctaggggaaactctctcaagcgagtg
gaggcaagtactgattgtcgagttttgattagagggcgtggtagcattaaggatccagct
agggaagaaatgatgagaggaaaaccgggttatgagcatttgaacgagcctctccacata
ctagttgaggcagagttgccagttgaaattattgatgctcgccttatgcaagcccgtgag
attcttgaggacttgctcaaaccaatggatgaatctcacgatttctacaagaagcaacag
ctacgagagctagctatgcttaatggcacacttcgtgaggagggttcgcccatgtccagt
tccgtgtctcccttccacaatagcctcggaatgaagagagccaaaactagggggtaa
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