Cucurbita pepo subsp. pepo (vegetable marrow): 111797977
Help
Entry
111797977 CDS
T05351
Name
(RefSeq) rRNA methyltransferase 1, mitochondrial
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111797977
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Other ribosome biogenesis factors
111797977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-GeneID:
111797977
NCBI-ProteinID:
XP_023536668
LinkDB
All DBs
Position
LG07:complement(9397713..9400008)
Genome browser
AA seq
570 aa
AA seq
DB search
MRVSSGARCYKSFHSSNFHRTCPKLPINSNWVSCTVSSSGSCQSFHVNFSLANLMNLSIR
SHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAATNSFEK
ARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKRYGKAPV
GSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAIADPRWD
KIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAGRREFYA
LYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQGLVLDA
SPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAP
LSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVPPGAPTI
LVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAV
ESLNVSVAAGVLVHHLIGSNYKNESYEPSI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagagtttcttcaggagccagatgctacaaatcatttcactcctcaaatttccaccgg
acgtgtccaaaactcccaataaactctaattgggttagttgtacagtttcttcatctggg
tcatgtcagagctttcatgttaatttctctctggccaaccttatgaacctttcaattcgt
agtcaccattgctctccagaaattaggaaattagtaagccccaaattgagctcacctgct
ttgaccattgaatcttctctgaattctcgaacgtattcgagctcccattcaattaaagac
gaaggagtgaaatctagggataagcttccttggttagcagcaacaaacagttttgagaag
gcaagatggttggataaatcaacaacaaagaagagaggggatcgatcatcatggaaggaa
tcaaattctgggtcagaaaagatgaggtcttcatgggactattcaaagaagacaattggg
aaaaggggtaataggccatctggggatgaacaggaaaagagatatggcaaagcacctgtt
ggaagcgcttaccgttcttcttgggaggtctctgcagagaagcttgctacacaacgcatg
gagtatgcagaggaaagaagagaaagtaggaggggaagagttgataatgaggagcagcga
agccgtgatgtcgaagtagaagatgaagaaacggaggccattgctgatccgagatgggat
aagatcaaaagtaaatttgagagacctgagtttcagagatggaataaacaggaaagcttg
agtagaaaaacatggaaggaagcttctgaatccactctgcctaaaatggttggtgaaggt
gtttatggtgtcggaccagtgttggctgctttgtcagctggaagaagagagttctatgca
ttgtatatgcaagaaggactcgacttgaacaacaataacaagaagaagaaggacaagaaa
gggtttgagaaagttcttaggttggctgaaaggaatgcgttaaccgtaaaggaaatatcg
aagcatgatttgaatatgctttcggataaccgtccacatcaaggtctcgtgctagacgcc
tctccgttggaaatggtaaaaataatggagttggatcctgtctcacttgaagaagacaaa
ggctcgctttggttagcgttggacgaagttacagaccctcaaaacttgggggcgataata
agatcggcttatttctttggtgcgtcgggggttgtgttatgtgcaaagaattcagctcca
ttaagtggtgttgttagtaaagctagtgctggttcgctcgagttgatggagcttaggtat
tgtaagaacatgatgcaattcttaacatcctcggctgagaacggttggcgagtccttgga
gcttcggtttcttcgaaatccattgatttggaagaggtaccaccgggggcaccaacaatc
ctagtgttgggcagtgaaggcactggtttgaggcccttggtggagagatcttgttcacag
cttgttaaaatacctgggaatattccagttgatatagcaatggataaagataatgacatc
gaaacaacacaaccaacaaaggaaagctcggttgacgagtttcgatccttcatggctgtg
gagagcttaaacgtcagcgttgcagcaggcgtgcttgttcaccacctaattggaagcaat
tacaagaatgaatcgtatgaaccctctatttaa
DBGET
integrated database retrieval system
