Cucurbita pepo subsp. pepo (vegetable marrow): 111798071
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Entry
111798071 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1-like isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111798071
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111798071
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111798071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf-ANAPC11
zf-RING_6
zf-RING_16
RING_XB3-XBAT31
7tm_3
DUF1451
zf-Nse
zf-RING_10
Sina_RING
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
111798071
NCBI-ProteinID:
XP_023536798
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All DBs
Position
LG01:complement(471841..477445)
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AA seq
481 aa
AA seq
DB search
METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGEQ
DPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEES
VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKK
QTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTVPPFWHALFIILV
NDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRFFLN
KDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDLC
AICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQL
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcggcttccaattctgatccttattccaattcttcttcacccacaacttct
cctacctcctccagatttggggtctcgatcccttcgctcaatttcttccgttcgcctctg
tccgtcattttggattactctggaattcttcccactagggctgttcctcatgaatcggaa
cctataatcaacggctctgccacccctgatttgcgggtttattctcaaaatcagaatcac
ttgatgactaccacttcttcttcttcttcttcttctagtaatagtcccacctcctcctcc
tccggtaataccagcccctctggggaggtttcgattaggattattgggtctggtgagcaa
gatccttctccggctctggttggacaagctggctatgagcaaaatggtggacttcctgtt
tctggggatcagccggaatcccctgatgaggaacgagttcctttggtgtccactgcttct
tcgtctattcaatctggaagcagtcgtgtttcagaatctggaaatggcgtggaagagagt
gttaatagagattcgtcttatcagagatacgatatccagcaggttgccaggtggattgaa
cagattcttcctttctctttgctactgctgatagtctttatccgtcagcatttggaaggt
tttttcatcacaatttgtatatcagctgttatgtataagtcgaacgatattgtcaagaaa
cagactgctctaaagggggagaggaaaatttctgtccttgctgggacatctattgcattt
ttggttcatgttattggaatttactggtggtgccatagtgatgatcttctacacccgtta
gtcatgcttccaccaaagacagtaccaccattttggcatgccttgttcataatcttagtt
aacgatacgatggcgaggcaggttgcaatggctctcaaatgtcttcttcttatttactac
aagaatggcagaggccataattttcgccggcagggtcaaattttaactctcatggaatac
actcttctgttgtatcgtgcattattaccggcacctgtatggtaccggttcttcttgaac
aaagatcaagggagccttttttcatcactgacaacaggattgtatttaactttcaagcta
acgtctgttgttgagaagattcaatcattcgtggctgcatttaaggctctatcacaaaaa
gaagtccattatggatcatatgccacatcagaacaggtaagtgctgcgggagacctctgt
gctatttgccaggagaagatgaatgctccaatcctgttacgctgtaagcacatcttctgt
gaagattgtgtttctgaatggtttgaaagagaaagaacttgccctctctgccgggcgctg
gtaaagccagcagaactccgaacatttggcgacgggtcgaccagcttactcttccagttg
ttttag
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