Cucurbita pepo subsp. pepo (vegetable marrow): 111798118
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Entry
111798118 CDS
T05351
Name
(RefSeq) tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111798118
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111798118
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Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
111798118
NCBI-ProteinID:
XP_023536863
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Position
LG07:2365021..2371331
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AA seq
444 aa
AA seq
DB search
MSSSNLPSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP
FGSLFQIESGDNGQNLACITPSREEEMEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDI
DALRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA
YFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTY
LGSNPNPMEIVRMFNFDDEICARIMRSPLTDLASSQVSNGEHEVNIKAQDEASEPVNMDE
GPLTSTDQSSDLNSECIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAW
GLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTH
PFMQMNAFGGYILSGTKICDVAHQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgagtaatcttccatctgaatcgcctcgaaaccctagagtggcgtgggaaggc
tgcagcgttttactcgacatcaatgatggcgaccgcctggtttttgctcgactctcgcct
gcctctacgctgaaaatcgggaataaaagttactctctgaagccattgatcggtcgtcct
ttcggttcgttgtttcaaattgaaagtggagacaatggtcaaaatttggcttgtattacg
ccctccagagaagaagaaatggaggagatgaaggaagaacaggtggtcaaagatgagctg
agagataacagagcgcttgtagacaataataaggcacaaagcctctctagtgaagatata
gatgcactgcgaagtcagggtgcaactggtgatgaaattgtggaagctctcattgccaac
agtgcaacatttgaaaagaaaacagttttctctcaggagaaatataggctcaaaaaacag
aagaaatatgctcctagggtacttttgaggagaccttttactcgaagtatatgtgaggca
tacttcaagaaatttccagctagaatcggattcttgagagtggatgctctgtctcttctt
ctttcttttgccaacgtgacttcaaattctgatgttcttgtgtttgatatggttggtggt
cttatcactggagctgtggctgagcgcttaggaggcaagggttctgtatgcaatacatac
cttggaagtaatccaaatcctatggaaatagtaagaatgttcaactttgatgatgaaatt
tgcgcaaggataatgcgttcacctcttaccgatcttgcctcatcccaagtttctaatggt
gaacatgaagtcaatattaaagcacaggatgaggcatctgaacctgttaatatggatgaa
ggccctctaacatctacagaccagtcttcagatctcaactcagagtgtatagtttctcca
ttaactaaagtattaaaatgcgcaaaagctggagataaggcaccgccagaagttgttaaa
tcatggaaagaaaatggttttacaagcctaataattgctgctccacagtcggatgcatgg
ggccttgttaaagatctgttgcctcttgtagcaaattctgccccatttgctatctatcac
cagtatcttcagcctcttgcaacttgcatgcataaactgcagcttgagaagatggcaatc
agcttgcaaatatcagaaccttggcttcgtgaataccaggttcttccttcgagaacccat
cccttcatgcagatgaatgcgtttggtggatacattctaagtgggacgaagatatgtgat
gtagcccatcagtaa
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