KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111798129
Entry
111798129         CDS       T05351                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03020  RNA polymerase
cpep03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111798129
  09124 Replication and repair
   03420 Nucleotide excision repair
    111798129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpep03021]
    111798129
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111798129
Transcription machinery [BR:cpep03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111798129
  RNA polymerase III system
   RNA polymerase III
     111798129
  RNA polymerase I system
   RNA polymerase I
     111798129
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111798129
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 111798129
NCBI-ProteinID: XP_023536875
LinkDB
Position
LG07:90399..91174
AA seq 71 aa
MIIPVRCFTCGKVIGNKWDRYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
NYNTLDKSDTS
NT seq 216 nt   +upstreamnt  +downstreamnt
atgatcatcccagtgcgttgcttcacttgcggaaaggtgattggaaacaaatgggatcgt
tacctcgatcttctacaggctgactattccgaaggggatgcacttgatgcactgggtttg
gttcgttactgctgtaggcgaatgctcatgactcatgttgaccttattgagaagcttctt
aattacaataccctggataagtctgataccagttag

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