Cucurbita pepo subsp. pepo (vegetable marrow): 111798290
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Entry
111798290 CDS
T05351
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111798290
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111798290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
111798290
NCBI-ProteinID:
XP_023537118
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Position
LG07:complement(6962398..6971944)
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AA seq
1146 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVGYLFDDCSEALLKVKQAFRSTDVDLPPEESTAPYHSITLPETFDLDDFE
LPDNELYQGNYVDHHVSSREQITLQDTMDGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
FVEKIIVKDHDEISDNDPRALSPSTVLKDKDENTKEILETFDTLQDPSSNARQVDDYNLA
SVQDSDGSLKVEVRGTEPKAVEIEMNESRKSDINGGPTDVLDWSSHNDLDCETTRPMHLK
ENGHLSSDPENKDGKLEQFSSPADETMEKMKGDALNGSSTGEEMNSGVVINNELEMTFLD
PVDAECDRSRATLDPTAMSPSRSGVTPDFEDTGHKAPSDSTYALASEGCTIGDQPSLKSM
DNSSEALSAGKVARDMTYQEESPGRPEVIDSESKEFREPKDTETRNSFNGEETPSTEKSV
LLSCNSRVTKPSLEGESCQATDAATQNLEISEKADTEVLEDGQAGFRDSDKRLDCALSND
ICTEVSNRSPTSDFPAPEKLLSVPEGLTEIHGDNLSLNSSLDKGNLVEDDGGVSGSNLMS
GKKRSFTESTLTAQSLNSAESVGAHRSKRVAESIPDDDDLLSSILVGRRSSVLKMKPSPP
VHETITLKRPRSTVGVGISKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEI
SMIQRQFLEDEIFSESIYSGISKELSSLHAEAFDLNEIRVYEKDPEAGNDFESAIRPNTT
EESATETAPEEVIGKNDLQSQPARATVQNETESAQELTLECPDLDVHEQQQATTIENAGP
EPRNVADAANSFDIHELELPSLVIGDKYDDPNASLQKILESQHGGDDAFTVDTGNIGLDN
VNANDCTEIRDNVNEEKYDHNVSLVTSPRENGESNYLTPENGEKPDESVLDVKLGEIDGD
RVNTADVVCDEKDAASVCLIDGAPMDSQYSTGFVHPDYHEEADLLNTVDTEMTILDHPTI
AEDRGDFEDATAANDIEFLNEDDEAEEDEDNTQFAADPSFLENSGWSSRTRAVARYLQNL
FDRDTVHGRKVLYMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERPFDNISIKPRIN
LMKSNF
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgttctattctcaattcatattggccaagaaagggccgcttgggacaatatggatagcg
gcacatttggagaggaagctgcggaaaaatcaagtggcagacactgatatcggtgtctca
gtagattcaattcttttccccgacgtgccaattgcgctgcgattgtccagccatcttctc
cttggggtggtgaggatctattctagaaaggtgggttacctatttgacgattgtagtgaa
gctctgcttaaggtaaagcaagcgttccgttctactgatgttgacttacctcccgaagaa
tcgactgctccgtatcattccatcactctgcccgagacttttgatcttgacgattttgag
cttccagataatgaactttatcagggtaattatgtcgatcatcacgttagttctcgggag
caaattacccttcaagatactatggacggtgtagtctacactacttctcaatttggcttg
gatgagcgtttcggtgatggagatgcttcacaaatcggtttagatctcgatgaggaactc
tttgtcgaaaagatcattgttaaggatcacgatgagatttcagataacgatcctcgagca
ctttctccatcaaccgtcttgaaagacaaggatgaaaatacgaaggaaatcctagaaacc
tttgatacgctgcaggatccatcatctaatgcgagacaagtcgatgattacaacttggct
agtgttcaggatagtgatggttctttgaaagtggaagttcggggtacagaaccgaaagcc
gtggagattgaaatgaacgaatccaggaagtcagatattaatggcggccctaccgatgtt
ttggattggtcttcccataacgatttggattgtgagactaccagacccatgcatcttaaa
gagaacggccatctttctagtgacccggaaaacaaagatggaaaactcgaacagttttct
tcgccagccgacgagacaatggaaaagatgaaaggagatgcattaaatggctcaagcaca
ggagaagaaatgaacagtggagttgtaataaacaatgagcttgaaatgacctttcttgat
cccgttgatgcagaatgtgatcgcagcagagctacgttagacccaacggccatgtctcct
agtcgctccggtgtcacccctgattttgaggacacgggacataaagctccttcagatagc
acatatgcattagcctcagagggttgtacgatcggtgatcaaccatccttaaaatccatg
gacaactcgagtgaagcgctctcagctggaaaagttgctcgagatatgacatatcaagag
gaatctcctggtaggcctgaggttatcgattctgaatccaaggaatttcgggagccaaag
gacaccgagactcggaattcttttaatggtgaagaaactccatccacggagaagtccgtg
ctactgtcatgcaattctcgtgtaactaagccatctcttgaaggtgaaagctgccaagca
actgacgctgcgacacaaaatttggaaataagtgagaaagccgataccgaagttctggaa
gacgggcaggctggtttcagggactcggacaaacgtttggattgtgcattgtctaatgat
atttgcacagaggtttcaaataggtctcccacctcagatttccctgcacccgagaagttg
ctttctgtacccgagggccttaccgaaatacacggtgacaacttatcattgaattcttca
ctggacaaaggaaacttggtcgaggatgacggaggtgtttctggaagtaatcttatgtcg
gggaagaagcgaagcttcacggaaagtactttaacagcacagagtttgaactcagccgag
tccgttggggcgcaccgatctaagagagttgcagaatccattcctgatgacgacgatttg
ttatcttctattttagttggaagacgatcgtcggttttgaaaatgaaaccgtcacctccc
gtgcatgaaaccataaccttgaaacgtccacgatcgacggttggagttggcatctcaaag
aagaaggtgcttatggatgatatgatggttttgcatggagacacgatacgtcatcaactt
acaagcacggaggacatacgtcgtgttcggaaaaaggcaccctgtactcgtcctgaaatt
tcgatgattcagagacaattcttagaagacgaaattttcagtgaatccatatattcaggt
atttccaaggaactgtcgtcattgcatgccgaagcatttgaccttaacgaaatcagggtt
tacgagaaggatccagaggcaggaaacgatttcgagtctgctattagaccgaataccact
gaagaaagtgcaacagaaacagcccctgaagaagtcattggaaaaaatgatcttcaatct
cagcctgctcgggctactgtgcagaacgagactgagtcagctcaagagttaacattagag
tgtcctgatctagacgttcacgagcagcagcaagcgacgacaattgagaatgctggaccg
gaacccagaaatgttgctgatgcagctaatagcttcgacattcacgagttggaattacct
tccttagtcattggggataaatatgatgatccaaatgcttctttgcagaaaatattggaa
tctcagcacggtggtgatgatgcttttacggtggataccgggaatataggtctcgacaac
gttaatgctaatgattgcaccgagatcagagataatgttaatgaagaaaaatacgatcat
aatgtttcccttgtaacctcgcctcgagaaaacggtgaatcgaattatctgactcctgaa
aatggtgaaaaacctgatgaaagcgtcttagatgttaagttaggggagatcgatggggat
agagtaaatacagcagacgtcgtttgcgacgagaaggatgcagcgtctgtttgcttaatc
gacggagcaccgatggattctcaatattctacgggatttgtacatccagactatcatgaa
gaagctgatttgctcaataccgtggacacggaaatgactatcctcgaccatcctactata
gccgaagaccgtggtgacttcgaggatgctacggcggctaatgatatagaatttttgaac
gaagatgacgaggccgaagaagacgaggacaacacgcaatttgcagcagatcctagcttt
cttgaaaacagtggatggtcttcccgtaccagggcggttgcaaggtaccttcaaaatctc
tttgatagggacactgtacatgggagaaaggtcctttacatggataacttactcgttaac
aaaactcggaaggaagcttcaagaatgtttttcgagacattggttctcaagacaaaggat
tacctccatgtagaacaggaaagaccctttgacaacattagtataaagccaagaataaat
ctcatgaaatcaaatttctga
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