Cucurbita pepo subsp. pepo (vegetable marrow): 111798413
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Entry
111798413 CDS
T05351
Name
(RefSeq) transcription initiation factor IIF subunit beta
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111798413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111798413
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111798413
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
111798413
NCBI-ProteinID:
XP_023537305
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Position
LG07:2517569..2523153
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AA seq
259 aa
AA seq
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MEDENGGGSSSNLDTGKADRSVWLMKCPLLVAKSWQSHPPSDPLPLAKVILSLDPLQSDE
SSSLQFKMEMAGTETGNVPKSFSLNMFKDFVPMCVFSEASQGKMSMEGKVEHKFDMKPHS
ENLEMYGKLCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMVGLISSTSKDKRKVAPVKQ
PEVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQ
GTYELKPEYKKSVEDTGGD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgagaacggcggcggtagtagcagtaacttggataccgggaaggcggataga
tcagtgtggctgatgaagtgcccgttgttggtcgccaagtcatggcagtctcatcctcca
tctgatcctcttcctctcgctaaggtcattctctctctcgatcctcttcaatccgacgag
tcctcttctctccagttcaagatggagatggctggaactgagactggaaacgtgccaaaa
agtttttccttaaacatgttcaaagactttgtccccatgtgtgtcttttctgaggcaagt
caaggtaagatgtcaatggaagggaaggtagaacataaattcgatatgaagcctcatagt
gaaaatcttgaaatgtacgggaaattgtgccgtgaaaggacaaacaagtccatggtcaag
aatagacaaattcaagtgatagacaacgaccgtggggtgcatatgaggccaatgcctggt
atggtgggtttgatcagttcaacttcaaaggataagaggaaggtggcgccagttaaacaa
ccagaagtaaaaagaactagaagggatcgtggggaactggaagatataatgttcaagcta
tttgaaagacagccgaattgggccctaaagcagctagtccaagagactgatcaacctgca
caattcttgaaagagatactgaatgagctttgtgtctacaacaaaagagggactaatcaa
ggaacctacgagcttaagcccgaatacaagaaatcggtcgaggataccggcggagactag
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