Cucurbita pepo subsp. pepo (vegetable marrow): 111798481
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Entry
111798481 CDS
T05351
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111798481
Membrane trafficking [BR:
cpep04131
]
Protein recycling
Others
EARP complex
111798481
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
111798481
NCBI-ProteinID:
XP_023537423
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Position
LG07:5254353..5285173
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AA seq
1086 aa
AA seq
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MQPNLFPFGSVLGNPFTYNGDLNEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRS
ARSLGLLPTPTDPPEVQVPARAVAAAAVARALAGLPPHQRFSLPSSSEELSSIYGSRSHG
HEVEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATTRLAQLDKVAERLSRHVMEH
HEVMVKGMHLVRELEKDLKIANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALLDMVP
VLSELRHAVDMQSMLESLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEVWLGR
TLQKLDLLLIEVCQEFKKEGYLTVIDAYALIGDVSGLSEKIQSFFMQEVISETHSSLKDI
VQEDQDIRIQNSRLTYSDLCLRIPESKFRQCLLKTLAVLFTLMCSYYQILSFQLDTKDSV
QESPNMNQLEDNCDLNLGDTEESTTRIMNPVYVDGSDSNMESRTDSSTASTSGSPWYHLR
KDAISFVSQILQKGRKNLWQLSTSRVSVLLSSVAVCSTSIHQFLKNYEDLNVFILAGEAF
CGVEAVEFRQKFKIVCENYYGTFHKQSMHALKMVMEKENWLILPPETVQVVSFAGLIGDG
APLFVPSDGKSSNTKVRQSDKSASSVSTGGGRSGFLQWIKSGNPFLLKLMHTCKEDIPNG
AFYGELDGGAGGSSHRNSHSENTDNLENGGHAVSEGEDENEDLLADFIDEDSQLPSRISR
PKLPRNSSNHNFDEVSAQTGSSLCLLRFMDKYARLMQKLEIVNIEFFKGMCQLFELFFYF
VYETFGQPNTTSGGKGFPDSLNYKLKAALSRASQDCDQWIKSNSSSPSASNSTFSFNEVT
PSPPGSSFGYLHGTTFGLKERSAGADSLSLVARIMHRSKAHIQSMLLQTNATVIEDFYAH
LLDAVPYLIEHIHRNTARLLLHVNGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKT
RLAHSGVRNEVQNLLLEYGLDLVAETLIEGISRVKRCSDEGRALMSLDLQVLINGLQHFV
SANVKPKLQMVETFIKAYYLPETEYIHWARAHPEYSKSQIIGLVNLVALMKGWKRKTRLE
VLEKIE
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaatttgtttccatttggcagtgttcttggaaaccctttcacgtacaatggt
gatttgaacgaaggattcgagacgtccaggtttctcttctttgttccgttttttctgctg
caaggaggtggaatggacttgtctaaggttggggagaagattttgagctcggtgaggtct
gctagatcgcttggacttcttcctacccctactgatcctccggaggtgcaggttcccgca
cgtgctgtggctgcggcagctgttgcccgtgcacttgctggattgcctcctcatcagaga
tttagtctcccatctagctctgaagaactgagctcaatatatggcagtagaagtcatggt
cacgaagtagaggaactagaggaagtattctatgaagaggattttgacccagttaggcat
gtgttagagcatgttccatcagaagaaaatgatctggaatatctggagaaacaggctaca
acgagattagctcaacttgataaagtggctgaacggttatctcgtcatgtaatggagcat
catgaagtgatggtgaaggggatgcatttggtcagggagttggaaaaagacttgaagatt
gcgaatgtcatctgcaggaatgggaagagacacctaacttcgtcaatgcttgaagtctct
agagatctcattgtaaactctaattcgaagaagaaacaagcacttctggacatggttcca
gttttgagtgagcttcgtcatgcggtggacatgcaatcaatgcttgagtctcttgttgaa
gagggaaattattacaaggcttttcaggttttatccgagtatttgcagctattggatagt
ttttcagagctttcagtcattcaagagatgagccgtggtgtagaggtttggcttggaaga
accctacaaaagttggatttacttttgatagaagtctgtcaggagttcaagaaggagggc
tatttaaccgtgattgatgcttatgcactaataggggatgtgtctggcctttcggaaaag
atacaaagcttttttatgcaggaagttatatcagaaacccattcttccttgaaagacatt
gtgcaagaggatcaggatatacgtatacaaaatagtaggcttacatacagtgatctatgc
cttcgaatacctgaatcaaagtttaggcagtgtttgttaaaaacactagctgtcttattt
accttgatgtgttcatattatcaaatcttaagcttccaactggatacaaaggattcagtt
caagaatctcccaacatgaatcaactagaagataattgtgaccttaatttaggagataca
gaggaatcaacgacaagaattatgaatcctgtttacgtggatgggagtgattctaatatg
gagtcccggacagatagcagtacagcatcaaccagtggttctccctggtatcatctgaga
aaagatgctataagttttgtttcccaaatccttcaaaaaggccgtaagaacctctggcaa
ctatcaactagtcgtgtgtcagtactgctttcttctgttgctgtttgttcaacgagcatt
catcaattcttgaaaaactacgaagatctcaatgtcttcatattggctggagaagccttc
tgtggagttgaagcagttgagtttaggcaaaagttcaagattgtttgtgaaaactattat
gggacttttcataagcagagtatgcatgctctaaagatggttatggaaaaagagaattgg
cttattctgccacccgaaacagttcaagttgttagttttgctggactgattggtgacgga
gcacctctgtttgttccatctgatggtaagtcgtctaacaccaaggtccgacagtcagat
aagtcagcaagctcagtcagtacaggtgggggtagaagtggttttttgcagtggatcaaa
agtggaaatccatttttacttaaactaatgcatacttgtaaagaagacatacccaatggt
gccttttatggagaattggatggaggtgctggtggaagttctcataggaactctcactct
gagaatacagacaatcttgaaaacggtggtcatgctgtatctgaaggtgaagatgaaaat
gaagatcttttagctgactttattgatgaagatagtcaacttccaagcagaatttcaaga
cccaaacttccacgaaattcttctaaccataattttgatgaagtttcagctcaaacagga
tcatctctatgccttttaaggttcatggacaaatatgcaaggcttatgcagaaactagag
atagtgaatattgagtttttcaagggtatgtgccagttgtttgaattgttcttctatttt
gtgtacgagacttttggccagcctaacactacttctggtggaaaaggcttccctgactcc
ctcaattataaattgaaggcagctttatcccgggcttcacaggattgtgatcagtggata
aaatctaattcatcttccccatcagcatcgaattcaacattttctttcaacgaagttacc
ccaagccctcctggcagtagcttcggttacttgcatggaacaacttttggtctcaaggag
aggagtgcaggtgctgactcattatcacttgtggcaagaataatgcacaggtctaaagct
catattcaatccatgcttctgcaaacaaatgcaactgtaattgaagacttttatgcacat
ctgttggatgccgtcccatatctcattgagcatattcataggaacactgcaagactgctt
cttcatgtcaatggttatgttgatcggatagccaatgcaaaatgggaagttaaagagctt
ggactcgagcataatgggtacgttgacttgttattgggagaattcaagcattataaaaca
aggctggcccatagtggagttcgcaatgaggttcaaaacctcctcttggagtatggactg
gatctcgttgctgaaactcttatcgaaggtatatcacgagtaaagagatgttcagatgaa
gggcgcgctctcatgtcattggatcttcaggttttaatcaatggcttgcaacatttcgtt
tctgcgaacgtcaagcctaagttacaaatggttgaaacgttcattaaggcatactatctt
ccagaaactgaatacatacactgggcacgtgctcacccggaatacagtaagagccaaatt
attggtttggttaacctggtggcattgatgaaagggtggaagagaaaaacccggttggaa
gtattggagaagattgagtga
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