Cucurbita pepo subsp. pepo (vegetable marrow): 111798645
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Entry
111798645 CDS
T05351
Name
(RefSeq) SNW/SKI-interacting protein-like
KO
K06063
SNW domain-containing protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111798645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111798645
Spliceosome [BR:
cpep03041
]
Complex B
Other components
Prp19-related factors
111798645
Complex C
111798645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
111798645
NCBI-ProteinID:
XP_023537689
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All DBs
Position
LG07:6614313..6617714
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AA seq
603 aa
AA seq
DB search
MATLKDLLPAVKSTTVTHYDHSNDPWFKQRFSSLETEQASVVKANPVPPYMKRGGFVPRR
VEDFGDGGAFPEIHIAQYPLDMGRDRSSKPGSKILPVTVDAHGNVAYDAIVKQNENSRKI
VYSQHKDLIPKFLKNDEVSDEDDELQKEIEETTEETKSALEKIVNVRLSAAQPKNVTKQS
MDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPIEPPKFKHKRVPKASGSPPVPVMHS
PPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALY
VAEQKAREAVAMRSKVQKEMLMKQKEKKELELRALAQKARSERTGAAPPSVHYSSERDAV
DTSEMKGDFERVRETEKDLPKETREEREERLQREKIREERRRERERERRLEAKDAAMGKK
SKITRDRDRDISEKVALGMASTGAGREGEVMYDQRLFNQDKGMDSGFANDDQYNIYDKGL
FTAQPTLSTLYRPKKDADSDMYGGADEQLDKITKTDRFKPDKKFSGTAERSGPRDRPVEF
EREVEEADPFGLDQFLTEVKKGKKAMDKVGAGGTMRAGAGSSMRDGYEGGGSGRTRIGFE
RGH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctgaaagaccttcttcctgctgttaagtcaaccactgtaacacactatgat
cattcaaatgatccatggttcaagcagcggtttagttccttagaaacagagcaagcttct
gttgtcaaggcgaatccggtgccgccttacatgaagcgtgggggatttgttccaaggaga
gttgaggattttggtgatggtggtgcttttccagagattcacattgctcaatacccactt
gatatgggtagagatagatcgtcgaagcccggatcgaagatccttcctgttacggttgat
gcacacggaaatgttgcgtatgatgctattgtcaagcagaatgagaattctaggaagatt
gtgtattcgcaacataaagatcttattccgaagtttttgaaaaatgatgaagtgagtgat
gaagatgatgagttgcagaaagagattgaagaaacaactgaggaaacgaaatctgcactt
gagaagatagtaaatgtaagattgagtgcagcacagcctaagaatgtaaccaaacaatca
atggattcgaagtttatcaagtataagccgtctcagcaatcagctgcgtttaattcgggc
gccaaggagagaataatcagaatggtggagatgcctgtagatccgattgagcctccgaag
ttcaagcacaaacgtgttcctaaagcttcggggtctcctccggtgcctgttatgcattct
cctccacgtcccgtcacggtgaaggatcaacaggattggaagattccaccttgtatttca
aattggaagaatccaaaagggtatacaattccacttgacaagcgccttgcagctgatggg
agaggccttcaagaagttcaaatcaatgataactttgcaaagctatcagaagcactgtat
gttgcagaacagaaagctagagaagcagttgctatgagatctaaggttcagaaagaaatg
ctaatgaagcaaaaggagaagaaggagttggagcttcgagcattggctcagaaagctcgg
tctgagagaaccggagctgcacctccttctgttcattattcatccgagagggacgcagta
gatacttctgagatgaagggggacttcgaacgtgtcagagaaaccgagaaggatttacca
aaggaaacaagggaggaaagggaagagaggttgcagcgggagaagattcgtgaggagcga
cgtcgggagagggagagggaaagaaggttggaggctaaagacgcagcaatgggaaagaag
agtaagattacaagagacagagatcgtgatatcagcgagaaggttgcacttggtatggct
tcgaccggagcaggtcgagaaggggaggttatgtatgaccagaggctatttaaccaagat
aaaggaatggactccggatttgccaatgacgatcaatacaacatatacgacaagggccta
tttaccgctcagcctacgctttcaaccctttaccgacctaaaaaggacgctgattctgat
atgtatggaggtgctgatgaacagttagacaagataacgaaaaccgatcgcttcaaacca
gacaagaagttttcaggcacggcggaaaggtctggacctagagataggccagttgagttc
gagagagaggttgaagaagccgatccattcggactcgatcagttcttgacagaagtgaag
aaaggtaagaaagctatggataaagttggcgctggtgggacaatgagagctggtgcgggt
tcatcaatgcgagatggctatgagggtggtggctctggtagaactcgcattggatttgaa
agaggccattaa
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