Cucurbita pepo subsp. pepo (vegetable marrow): 111798738
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Entry
111798738 CDS
T05351
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111798738
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111798738
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111798738
Peptidases and inhibitors [BR:
cpep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111798738
Ubiquitin system [BR:
cpep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111798738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
CC190
Motif
Other DBs
NCBI-GeneID:
111798738
NCBI-ProteinID:
XP_023537824
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All DBs
Position
LG07:972602..978503
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AA seq
1059 aa
AA seq
DB search
MLVVGDLGFQILVLAACLVFPVFGIVLRRKWRLGMARTEEINRLLVLASEEAARVEIEAS
FGCTAAPISLNLHCAVCLSPTTTRCARCKAVRYCSGKCQIIHWRQGHKTECHPPKTSDWS
LEKENDYGDRIANQHHSISYDNKFGIENGQHIEPDEVLYDKLTLPSSDDSVKNVSVELHA
DEEENSTTEFADATSNTESSDDASRSENSSESCSPRSDGYLSAQNSFDKDDSTSRLSIVD
PNKPLSPNYAHLVNSVDKFAKRKTENHPAFVGIDPVYDNHSRAAEVRSIDGSCEAASSSF
QEHNGNSIRLKDGVHDDSVPSSINGAKNKKIPGSHSFLHFSFSVSGGTPSDAQVAQVNGN
VADGSLRTTSGINRTAGSNLQSDINIDSSEVRNSPSSCEGSGDKDNTVKELSDHPVVYLM
ISSSPRISPFPAVSKCESRSVRVSNTSMSAPLKSERSCPVFIQPDNSKIISKHSGNGSVV
NDSSVHLPTISSRESVPPTDSRKVGPTQVGAGVSSLDANFSRKSAYGFRPFALNEIKSKS
DHSYVANDSENAGKYNYKGHFPFELLVDLYNWNKVELQPSGLVNCGNSCYANVVLQCLIF
TPPLTAYFLQGLHSKACAKERWCFTCEFESLILEAKEGKSPLSPFRIISQLRKIGSQLVN
GKEEDAHEFLRCAIDTMQSICSMEAQVSRSGPMEEETTLIGFTFGGYLLSKIKCTRCENK
SERIERILDLTVEISGDIETIEEALQQYTSIEILDGDNRYQCGRCKSYVKANKRLSILEA
PNILTIALKRFQSGKFGKLNKPVIFSEILDLAPYMSSRSDKSPEYRLYGVIVHLDVMNAA
FSGHYVCYIRNNQNKWFKIDDSTVTAVEFENVLTRGAYMLFYARCSPRAPRLIRTKVMTD
SKEGCIPSLISGRSTSFKPSPNSTYPDSQNPHIYNNSSNDSSNISSFYRKFHQLQKLLED
DLTSDSSSLLSSNSDESSCSTNSSSDSTSTEDLPEYIYSDSGCGWNDSSQYAPVGAKTTE
SRPARPYQTNGISNLTSRRESTCREKAMHSMEDKKNGWR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcgttggagatttagggtttcagattctggttcttgctgcttgtttggttttt
cccgtttttggtattgttcttcgtcgcaaatggcggctaggtatggccaggacggaagag
atcaaccggctcttggttttggcgtctgaggaagctgctagggttgaaattgaggcatcg
tttgggtgtactgctgcgccgatttctctgaatcttcattgtgctgtttgtctcagtcca
acgaccacccgttgcgctcggtgtaaagcagttcgatactgttctggcaaatgtcaaatt
attcactggcgacaaggtcataaaaccgaatgccatccacccaaaacgtctgattggtct
ttagagaaggaaaatgattatggggataggatagcaaaccaacaccactctattagttat
gacaacaaatttggtattgaaaatgggcaacatatagaaccagatgaggtattgtatgac
aaacttacattacccagctctgatgactctgtaaagaatgttagtgtggagttgcatgca
gatgaggaggagaattcaactacagaatttgctgatgccacatcaaacaccgaatcatct
gatgatgcctcaagaagtgagaacagtagtgagtcttgttccccacgatctgatggatat
ttatctgctcagaactcctttgacaaggatgattctacatccagattatcaattgttgat
ccaaacaagccattatctcctaactatgctcacttggtaaactctgttgataaattcgct
aaacggaaaacagaaaatcatcctgcattcgttgggattgatccagtttatgataaccat
tcaagggctgctgaagttagaagtatagatgggagttgtgaagctgcttcttctagtttt
caagaacataatggaaattctattcggttgaaagatggtgttcatgatgactctgtccca
tctagtattaatggtgccaagaacaaaaaaattccagggagtcattcgttcctacacttt
tcattcagtgtgtctgggggtactccatccgacgcacaagttgctcaagtaaatggaaat
gtagcagatggaagtcttcgtactacttcggggataaacagaacggctggatctaatttg
caatcagatatcaatatcgactcttcagaggttagaaattcaccctcaagttgtgaaggg
tctggggacaaagataacaccgttaaggaactgtcagatcaccctgtagtttatttgatg
atatcttcatcacctcgtatcagtccgttccctgctgtttctaaatgtgaatcaagaagt
gttcgtgtttcaaatacaagtatgtcagcacccttgaagtctgaaaggtcatgcccagtt
ttcatccagccggataattctaaaattatatcaaagcatagtggtaatggatctgtagtg
aatgattccagtgttcatttgcctacaattagtagtagggagtcagttcctccgaccgat
tctagaaaagttggtccgacacaggttggtgctggtgtttcttccttggatgcaaacttt
tcgcgcaagtcagcttatggctttagaccttttgctctcaatgagattaaatctaaatcg
gatcacagttatgtagcgaacgacagcgagaatgctggaaaatacaattacaagggacac
ttcccatttgagctgcttgtcgatctatataattggaataaagtggagctccaaccatct
ggccttgtcaactgcgggaatagctgctatgcaaatgttgtgctccagtgtttgatattc
actccgcctttgacagcctattttcttcagggactgcattctaaagcatgtgccaaggag
agatggtgctttacctgtgagttcgaaagtctaatactcgaggcaaaagaaggcaaatct
ccactatctccgttcagaataatttctcaactgagaaaaattggtagtcaactcgttaac
gggaaagaggaggacgcgcacgagttcttgaggtgtgctattgacacgatgcaatcgatt
tgctctatggaagctcaagtaagtcgatcgggccctatggaagaagaaacaactctaata
ggctttacatttggtggctacctcctatcaaagatcaaatgcacaagatgtgagaacaag
tccgaacgaatcgaaaggattttagatcttactgttgagataagtggggatattgaaacg
atcgaagaagctcttcaacaatatacaagcatcgagattttggacggggacaatagatac
caatgtggcagatgcaaatcttacgtgaaagccaataaaaggctgtcaatattggaggct
cccaacatcctgactatagcattaaaacgattccagtcaggtaaatttgggaagctcaat
aagccggttattttttcggagatccttgatctcgcaccctatatgagtagcagaagtgac
aagtcacctgaatacaggctttacggagtgattgttcatttggatgtcatgaatgctgca
ttttctggtcactatgtatgctatatcaggaataaccaaaacaagtggttcaagatcgat
gacagcacggtaacagctgtggaatttgaaaatgtactgacaagaggggcttacatgctc
ttctatgcaagatgctcacctagggccccaaggttgatcagaaccaaagtcatgaccgat
tccaaagagggatgcattccatctttgattagtgggaggagtacctcatttaaaccaagt
cccaactccacatatcctgattcccagaacccccatatctacaacaattcatcaaatgat
tcttcaaatatcagttcgttttatcgaaaatttcaccagctccagaagctgttggaagac
gacttaacgagcgatagttcttctcttctcagtagcaactctgatgaaagctcttgcagc
accaacagcagcagtgactcaacgagcacggaggacttaccagagtacatttatagcgac
tctggatgtggttggaatgattcaagccaatacgcaccagttggtgctaaaacaactgag
tctcgacctgctcgtccctaccaaaccaatgggattagtaatctcacaagtaggcgagaa
tcgacgtgtagagagaaagccatgcattcgatggaggataagaagaatggctggcgttag
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integrated database retrieval system
