KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111798763
Entry
111798763         CDS       T05351                                 
Name
(RefSeq) protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111798763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111798763
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111798763
 Complex B
    111798763
SSDB
Motif
Pfam: Surp cwf21 CID CTK3
Other DBs
NCBI-GeneID: 111798763
NCBI-ProteinID: XP_023537856
LinkDB
Position
LG07:2109248..2121244
AA seq 883 aa
MSSFSITRKKTPFQKHREEEEAKKKREEDETARLYAEFVESFQGDNAPGSKTFVRGGTIN
PNEKLKSESEGEKSKDGVSVPKKGSRYVPSFIPPPLASKGKESDKKELDKPKEKEKGKSR
NIDHFMEELRHEQEMRERRNQDREHWREGRHGENSTVCAFSTEYNIFLISLRYLCAGVVV
YGYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGATVILSGSSGPPVTSVPSQNSELVL
TPNIPDITVEPPEDDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFELGSIEH
TYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTAKSPELEKESGPTYAAGRSR
RAELERTLTDSQRDEFEDMLRALTLERSQIKDAMGFALDNADAAGEIVEVLTESLTLRET
PIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEASLPDIMESFNDLYRSITGRITAEAL
KERVLKLLQVWSDWFLFSDAYVNGLRATFLRLGNSGVIPFHSLCGDAPEIERKANSDNLG
DGGKINQDAELAMGKGGAMKELMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEEEK
QSGFELDEHLKYSNSHSGRYSSSSRETKVDRDRAEISGWNRFGDDDTDFQRMGSVPLAQT
LSIPQPELKGFTKSGKNEPVLPISKWAREDDESDNEQKGGTRGLGLSYSSSGSENAGDGS
SKADEMDITTEASILMQPDNGLNEEQRQKLRRVEVALIEYRESLEERGIKSVEEIERRVS
IYRRQLESEHGLSDSNETALRKRRRDRPDDSNDSSRKLQRSRSHSDSPVPKSFNRDRDRE
NDVDREQERSRDRDGEKSGSRERDDHDRDRGKDRDRDRRRRAK
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgagttcattttccatcactcggaaaaagactcctttccagaaacacagagaggaggaa
gaggcaaagaagaagagagaggaggacgaaactgctcgattgtatgcggaattcgtggag
tcatttcaaggagataatgcacccgggtctaagacttttgttcgtggaggaactattaac
cccaatgagaaattgaagagcgaatccgagggtgaaaagtccaaagatggggtatctgtt
ccaaagaagggaagtagatatgtcccatcgttcattccacctccactggcatccaaggga
aaagaatctgacaagaaggagctggacaagccaaaggagaaagaaaaaggaaagtctagg
aacatcgatcattttatggaggagctgaggcacgagcaagagatgagggaaagaagaaat
caagatcgcgaacattggcgagaaggacgccatggagaaaattcaacagtatgtgctttc
agcaccgagtataatatctttttaatctctctaagatatttatgtgcaggagtcgttgtt
tatgggtatgaactgaaaattggatggggaaagtctgtcgctcttccatctcaagcatta
ccagcacctcctccaggtcatatggccattagaagtaaagagggtgccaccgttatctta
tctggctcatcaggaccgccagtcacttctgtcccaagtcaaaattctgaactggttctg
acacccaatattccggatattactgttgaaccgcctgaggatgatcatctccgccatgtc
attgacactatggctctttacgttctggatggaggttgtgcctttgaacaagctattatg
gagaggggtcggggaaatcctctcttcaacttcttgtttgagcttggttcaatagaacat
acttactatgtttggcgactttactcatttgctcagggggatactcttcaaaggtggaga
actgaaccttttatcatgataactggtagtgggagatgggttccaccgcctcttccaact
gctaaaagcccagagctagagaaggagtctggtcccacatatgctgctggaagaagcaga
cgtgcggagcttgaaagaacattaactgattcacaaagagatgagtttgaggacatgctt
cgggcattgacactagaaaggagtcagataaaggacgcaatggggtttgcattggataat
gctgatgcagctggagagatagttgaagttttaacagaatctctaacactgagggaaact
cctattcctaccaaagttgcacggttgatgctcgtgtctgatatccttcataacagtagt
gctcctgtcaagaatgcatctgcataccgcacaaagtttgaagcatcattacctgacatc
atggagagcttcaatgatctgtatcgcagtataacagggagaattacggcagaggccctc
aaggaacgagtactgaaattgttgcaagtatggtccgattggtttctgttctcagatgct
tatgtgaatggattgcgagccacattccttcgcttaggaaactcgggtgtgatccctttt
cattcattgtgtggcgatgccccagagattgaacggaaggccaatagtgataatttagga
gatgggggtaaaatcaatcaagatgctgaattggcaatgggaaaaggaggagctatgaag
gagttaatgaatcttccctttggagaattggaaagaaggtgcaggcataatggattgtct
cttgttggtggtagagaaatgatggttgcacgtttgctgagcctcgaagaggaagaaaaa
cagagtggatttgaacttgatgaacacttaaagtatagtaattctcattctggtagatat
tcaagtagctcgagagaaactaaagttgatcgtgatcgagcagaaatttctggatggaat
cgttttggggatgatgatacagatttccaaaggatgggttctgtgcctttggctcaaact
ctttccattccacagcctgaactaaaaggcttcacgaagtcggggaaaaatgagcccgtt
ttgcccatctctaaatgggcgagggaggatgatgaaagtgacaatgagcaaaaaggaggt
actagaggtcttggattaagttactcatcttctggaagtgaaaatgcgggcgatggttct
agtaaagccgatgagatggacattactacggaggcaagtattcttatgcaacctgataat
gggttgaatgaagagcagagacaaaagttaagacgtgtagaggtggctttgatcgaatat
cgtgagtccttggaagaacggggcatcaaaagtgtagaggaaatagagaggcgggtttcg
atttatcgaagacaactagaatctgaacatggattgtcagattccaatgagactgcatta
aggaagaggaggagggatagaccagatgacagcaatgattcatcaagaaagttgcagcgt
agccggagccatagcgatagcccagtaccaaagtcattcaaccgagacagggacagggaa
aacgacgtggaccgggagcaagaaagatcaagagacagagatggcgagaagagtggaagc
agagagagggacgatcatgaccgagataggggtaaagatagagacagggataggagaaga
cgagcaaaataa

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