Cucurbita pepo subsp. pepo (vegetable marrow): 111799014
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Entry
111799014 CDS
T05351
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111799014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111799014
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
SR proteins
111799014
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111799014
NCBI-ProteinID:
XP_023538161
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All DBs
Position
LG07:complement(731176..734651)
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AA seq
251 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGKVMESSSSMTRGRSRS
RSPRPRHRDDHRDRDYRRRSRSRSRERYDRDRPHRSERERHRSRSCSASPDRNKDRRRER
DDERRSASRSDRSMSPTRHSPDTRRSISPRRTPSRGRSDDEHSPQRENGSLDDKPVDSRS
PSPAKSDADVS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttggaagatcgggtcctcccgatatcagagatacttattcgcttctcgtc
ctcaacatcacattccgaaccaccgccgacgatctttacccgcttttcgacaagtatgga
aaagtcgtcgacgtcttcattcccagagaccgcaggactggggattctcggggatttgcg
tttgttcgatacaagtatgcggacgaagcacagaaggctattgacaagcttgacgggcga
atgttggatggtagagaaattatggttcaattcgctaagtacggtcccaatgctgagaaa
attcgcaaggggaaggtgatggagtcatcatcatcgatgacaaggggcaggtcaaggagc
cgcagtccacgtccaaggcaccgtgatgaccacagggatagggattacaggagaagaagc
cgcagtagaagccgggagagatatgatcgtgatagaccccacagaagtgagagagaacgc
catagaagtaggagttgtagtgctagtcctgaccgtaataaagatcgaaggagagaaaga
gatgatgaaaggcgtagtgcaagccgctccgatagaagcatgtcacccacccgacattcc
cctgatactcggagaagcatttctccacgtaggacaccatcgaggggtagaagcgatgat
gaacattcacctcagagagagaatggctcactagatgataagccagtcgattctcgtagc
ccatctcctgctaaatccgatgccgatgtaagctaa
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