Cucurbita pepo subsp. pepo (vegetable marrow): 111799104
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Entry
111799104 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111799104
KO
K19022
AP-5 complex subunit beta-1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111799104
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
111799104
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
111799104
NCBI-ProteinID:
XP_023538278
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Position
LG01:16138173..16143644
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AA seq
1131 aa
AA seq
DB search
MSDQTSDNTKPPLKSLSLQDWESFFEDFHSGGPRLHRWTSQFSITPSSLIDLVLSSIPKR
DFPLNLKLQLLHFIDEFVSLSDSPDSAVSESILERLVDTLRVVVQSPNSDGLHFTFSLKE
QIMVSTTSIFISLDALRNFDVRLLESLIELLLTVVNRPNHGIDRQTRAIASECLRELEKA
YPCLLSLVVGHLWSLCQSERTHASQSYILLFTTVISNIVAQRSSVSILSTSVPLVPFNVP
PSVLAPDSSVNREVSPGLNSKELRRAIAFLLESPQILTPPAMVEFMTMIMPVALALELQA
SMLKVQFFGMIYSFDPMLCHVVLMMYLHFLDAFDEQEGEIARRLLLISRETQQHLVFRLL
ALHWLLGLFRTDSPLGKKMTSAAEMGLNFYPAVFDPLALKALKLDLLAFTSIRNQMSKPE
TVSDQDSDSGKSVVKLLQDGLVCVSAFKWLPSGSTETAVAFRAFHKFLIGVSSHSVSDSN
ADKILVDSSIFRMLQEMLVELILENQRLVPVIVAFTDRLLRCQKHRWLAESLLQKFDEHL
LPKVAINYKLVSCFSVFNRMAENDTIPPRGLLGLFAKFMLFLVEKHGPDTGLKSWSLGSK
VLGICRTLLMHHQSSRLFLKMSRLLAFTCLYFPDLEVRDNARIYLRMLICVPGKKLRDLL
KLGDQPFGISQSLHSGALYNVQSPRLSHDLKKSRNISSYIHLKRKIPLLVKQSWSLSLST
LGVEDYKLGLSEGIRDGEPVVEERVTEFSSNIETINLAQEPLRVMDSKISKILDILRRHF
SCIPDFRHMPGLKVTIFCSLSFESEPFNRIWGSDTFAKNLDDTDNHPAMYATVLKFSSSA
PFGSIPSRHIPFILGESTGDEGSPSKRVSSLDIVPVQNGYGKDERFKALVAVELEPREPT
PGLVDVSIESTAGSGQIIRGPLQSITVGLEDLFLKAVVPSDISMDEIPGYYSDLFNALWE
ACGTSSNTGRETFSLKGGKGVAAISGTRSVKLLEVSVASLIEAVELYLAPFIVSVIGEQL
IEIVKDRDIIKNVIWEDMASENFSQLTSSVPDLDRGPLRLTYFSNEDEMGSNLSSYKRNM
GHFHILIFLPPRFHLLFQMEVSDCSTLVRIRTDHWPCLAYVDDYLEALFLA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcaaacttccgataataccaagccgccattgaagtccctttccttacaagat
tgggaatccttctttgaagacttccacagcggtggacctcgtcttcaccgatggacttct
caattttccatcacaccttcttctcttatcgacttggttctctcctccatccccaagcgg
gatttccctctcaatctcaagcttcagctcctccatttcatcgacgagttcgtttccttg
tccgattcccctgactctgctgtatctgaatccatattagagcgtttggttgataccctt
cgcgtggttgtccaatctccgaactccgatggccttcattttaccttctctctcaaggag
caaattatggtctccaccacatccattttcatttccctcgatgccttgaggaatttcgat
gttcgattgctggagagcttgattgaattgctgcttaccgttgttaatcgcccaaatcat
gggattgatagacagacccgcgcaattgcgtccgagtgcttgagggaattggagaaggct
tacccttgtttactgtcacttgttgtgggacatctatggagcttgtgccaaagcgagcgc
acgcacgcatcccagagctatattttgctattcacaaccgtcatcagtaatattgttgct
caaagatcgagcgtctcgattctcagcacgtccgttcctttggttcctttcaatgttccg
ccatctgttcttgccccagattcgagcgtgaatagggaggtttctcctggattgaattct
aaagaattgaggagggcgatagcgttcttgcttgaatcgccacaaattcttactccgcct
gctatggttgaatttatgacaatgataatgcccgtagctttagctttggagttgcaggcg
tcaatgttgaaggtgcaattctttggaatgatatattcctttgatcctatgctgtgccat
gttgttttgatgatgtatttgcattttttagacgcatttgatgagcaagaaggcgagatt
gctcgccgtcttttgttgatttctagagaaacacagcaacatctggttttccgtttgctt
gcactccattggttgttgggtttattcaggactgatagtccactaggcaaaaagatgact
tcagctgctgaaatgggtttgaacttttatccggcagtgtttgatccgcttgctcttaaa
gctttgaagctcgaccttcttgccttcacctcaatacgtaatcaaatgtccaaacctgag
actgtttcagaccaagattcagattctggaaagtcagtggtgaagcttcttcaagatggt
ctggtatgcgtatcagctttcaaatggctaccttcaggaagcacagaaactgctgtagct
tttcgtgccttccataaattcttgataggggtgtcatctcattctgtctccgactcgaac
gccgataaaattcttgtggattccagcatcttccggatgttgcaggagatgcttgtggag
ttaatattggaaaatcagagattggttcccgttatcgttgctttcactgaccggttgtta
aggtgtcaaaagcacagatggttagcagagagcctgctccagaaatttgacgagcatttg
cttccaaaagttgcaataaactacaaactggtgtcttgcttctcagtattcaatagaatg
gccgaaaatgatacgatacctccccgtggattgcttggactctttgctaagttcatgctg
tttcttgttgagaaacatggaccggatacggggctgaagtcttggtctcttggaagtaag
gtacttggcatttgcaggacgttgttgatgcaccaccaaagttctcgattgttccttaaa
atgtctcgtcttcttgcgtttacttgcctctattttcccgacttggaagttcgtgataat
gcaaggatctatttacgtatgctgatttgtgtacctggaaagaagcttagggacttgcta
aaacttggagaccaaccctttggcatttctcaatctcttcattctggtgctttgtacaat
gtccagtctccacgactttctcatgatctaaaaaagtccagaaacatctcatcctatata
catttaaaacgaaaaatccccttacttgtaaagcaatcctggtcattatctctatcaact
ctaggagttgaagattataagcttggtttgtcagagggtatcagggacggcgaacctgtg
gttgaagaaagggtgactgagttctcttctaacattgaaacaattaatctagctcaggag
ccgttgcgtgtgatggactcgaagatttccaagattttggatatattacggagacatttt
tcatgcattcctgacttcaggcatatgccagggcttaaagttacaatattttgtagctta
agttttgaatcggagccattcaatcgcatttggggaagtgatacatttgctaagaatttg
gatgatacggataaccatcctgcaatgtatgcaactgtgctcaagttttcttcatctgca
ccttttggttctattccatctcgtcatataccttttattttgggagagtctacaggggat
gaaggcagtcctagtaaaagggtctcctcattggacattgttcccgttcagaatggttat
ggaaaagatgaaagatttaaggctctggtagcagttgaattggaaccaagggagcccaca
ccaggactcgtcgatgtctcaattgaatctactgcaggaagtggccagatcattcgtggt
cctcttcagagtatcacagtaggacttgaagatttgtttcttaaagctgttgtcccatca
gatatttccatggatgaaatccctggttattattcagatttattcaatgctctttgggag
gcatgtggaacatcttccaatactgggcgagagacattttcactgaaaggaggcaaagga
gttgcagctattagtggaaccagatcagtcaaactacttgaagtctcagtggcttctttg
attgaggctgttgaactctacctggctccttttatcgtgagcgttataggcgaacagctc
attgaaatcgtgaaggatcgagatattatcaagaacgtcatctgggaggacatggcatct
gagaacttctcacaactgacctcttcagtacctgatcttgatagaggcccactacgtctt
acatatttttcaaatgaagatgaaatgggaagcaacctcagtagctataagagaaacatg
ggtcactttcatattttgatatttcttccaccaaggtttcaccttcttttccagatggaa
gtttccgattgttcaaccttagttcgaattcgaaccgatcactggccttgcttggcttac
gtcgatgattacttggaggctctgtttctcgcataa
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