Cucurbita pepo subsp. pepo (vegetable marrow): 111799143
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Entry
111799143 CDS
T05351
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111799143
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111799143
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111799143
NCBI-ProteinID:
XP_023538327
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Position
LG07
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AA seq
407 aa
AA seq
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MANPIVLLITFVLLLHMYSASSSPVADPQQVVEEVLTSINNATKRRNLGFLSCGTGNPID
DCWRCDPDWEKNRKRLADCAIGFGKGAIGGRNGKFYIVTDPSDKDVVNPKPGTLRHAVIQ
KEPLWITFKRDMVIKLKAELIMNSFKTIDGRGRSVHIAGGPCITIQYVTNIIIHGINIHD
CKQGGNMYIRDSPDHYGWRTLSDGDGVSIFGGSHIWIDHCSLSNCQDGLIDAIRGSTAIT
ISNNYMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWIMYAIGGSASPTINSQGNRYLAPDNRVRKEVTKREAAAESKWKNWNWKSEGDLMLNGA
FFRKSGAGASSSYARASSLSAKPSSLVSSMTAGAGVLKCSKGSPCST
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccccattgttcttctcataaccttcgttcttcttctccatatgtactctgct
tcttcctctccagtcgccgatcctcaacaagtggttgaagaagttctcacgagcatcaac
aatgcaacaaaaagaaggaacttggggttcctctcctgcggaactggaaacccaattgat
gattgttggaggtgcgaccccgattgggagaagaatcgaaagcgcctagccgactgcgcc
attgggttcgggaagggagccatcggcggcagaaatggaaaattctacattgtcactgac
ccatctgacaaggacgtggtgaacccaaaaccaggaactctccgccatgccgtaatccaa
aaagaacctttatggatcaccttcaaacgtgacatggtcatcaaactaaaagcagagctg
atcatgaactctttcaaaaccatcgacggtcgcggcagatcagtccacatcgccggtggg
ccatgcattacaattcagtacgtgacgaacattataatccacggcattaacattcacgac
tgcaagcaaggagggaacatgtacattagagattcgccggaccattacggttggaggact
ctgtcggacggggatggggtttcgatatttgggggcagccatatttggatcgaccattgc
tcgctgtcgaattgccaagatgggttgattgatgcgattcgtgggtctacggctatcaca
atttcaaacaattatatgacccaccataacaaagttatgcttttgggacatagtgattcg
tacactcaagacaagaacatgcaagtcaccattgcttttaaccattttggcgaggggctg
gtgcaaagaatgccacgatgccgacatgggtatttccatgtggtgaataatgactatacc
cattggattatgtacgccattggtggaagtgcatcgcccacaatcaatagccaagggaac
agataccttgctcctgataaccgagttagaaaagaggtgacaaagcgtgaggctgcagca
gagagcaaatggaagaattggaattggaaatcagagggagatttgatgttgaatggagcg
ttcttcaggaagtccggtgccggagcgtcgtctagctatgcgagggcgtccagcttgagt
gccaagccatcgtcgttggtgagttcaatgacggcaggagcaggagtgctgaaatgctca
aagggctccccatgctctacttga
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