Cucurbita pepo subsp. pepo (vegetable marrow): 111799146
Help
Entry
111799146 CDS
T05351
Name
(RefSeq) two-component response regulator ARR11-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111799146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111799146
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111799146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
111799146
NCBI-ProteinID:
XP_023538330
LinkDB
All DBs
Position
LG07:complement(204007..207059)
Genome browser
AA seq
557 aa
AA seq
DB search
MENGFSSPRSDVFPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERK
DGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI
RMKELRNIWQHVLRKKIQEGRDIEGHDVFEGLQILRNGSDRYDDSQFLRVEELFSVRKRK
DVDKYEEKEFGETCSTKKARVVWSVDLHQKFVEAVNQIGFDKVGPKKILDLMNVPWLTRE
NVASHLQKYRLYLSRLQKENDPKACFVVGMKQTDSSLKDGDGNFSVCSSLVVPQTDVTNS
SFSFSGDNFLQNVDSIGCEADRKRVVQEQTSEPKRAAATELIKTRCTHMKFNNSFASVES
EGKLAACYPWVEAPQMKLKQESKPHQVQINQLPSVSSISSGRSATEKDKGSSIESKAPFS
EDCSQQMVHLNPPKATTDSFSGKAKSFDEINDHFEPISTATAPLGVKNQNVIDLSSISTD
LGSGFPFSSFDEDLQGYLIQDGCYPKNLEQIIEFPDYGDPGIFTEGPTHLYDAMRFGYEY
SYDPTEYPVIDEGLFIA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatggcttctcttcgcctcgaagcgatgtgtttcctgtcggtcttcgtgttctt
gttgttgatgatgatccaacatggctcaaaatcctggaaaagatgctcaaaaagtgctct
tatgaagtgactacatgttgcctggcaagggaggctctaagcctgctaagggagagaaaa
gatggatacgacatcgtaatcagcgacgtaaacatgcccgacatggacggttttaaactc
ctcgagcatgtaggattagaaatggacctaccagttatcatgatgtcagttgatggagaa
acaagcagagtaatgaaaggggttcaacatggggcttgtgattatcttctaaagccaata
cgtatgaaagaacttaggaatatatggcagcatgtacttcgaaagaagattcaagaggga
agagatattgaaggccatgatgtttttgaaggccttcaaatccttagaaatggatcagat
aggtatgatgatagccagttccttagagtagaggagctcttttcagtgaggaaaagaaaa
gatgttgataagtacgaggaaaaagagtttggtgagacatgttctacaaagaaagccaga
gttgtttggtcggttgatctgcaccagaaatttgttgaagcagtaaaccagataggcttt
gacaaagttggccctaagaagattcttgatctgatgaatgtcccatggctaacaagggaa
aatgtagctagccatttgcagaagtatcgcctctatttgagtcgactgcagaaagaaaat
gatccaaaagcttgctttgttgttgggatgaaacagaccgattcgagtttgaaggatgga
gatggaaacttcagcgtttgtagctcgttagttgtgccacaaaccgatgtcacgaatagc
agcttcagtttttcaggtgataactttcttcagaatgtggattccataggctgtgaagct
gataggaaaagggttgttcaagagcaaacatcagagccaaaaagagctgctgctactgaa
ctgataaagacacggtgtacccacatgaaattcaacaactcgtttgcctctgttgaatct
gaaggcaagttagcagcatgttacccttgggttgaagctccacagatgaagctcaaacaa
gaaagcaagccacatcaagttcaaatcaaccaactaccatcggtttcgtccattagttct
ggacggtcagcaacagagaaagacaaaggaagctccattgaaagtaaggctccattttca
gaggactgcagccaacagatggtccatctaaacccaccaaaagctacaactgattcattt
tctggcaaggctaagagtttcgatgagatcaatgaccattttgagcctatttcaactgct
acagctccattgggcgtgaaaaaccagaatgtgatcgatcttagcagcatttcaactgat
ttaggaagtgggtttcctttttcaagctttgatgaagatttgcagggctatttgattcaa
gatggttgttacccaaagaaccttgaacagattatagagtttccagattatggtgatcca
ggcatcttcactgaaggtccgactcacctttatgatgcaatgaggtttggctatgagtat
tcctatgacccaactgagtatccagtgatagatgaaggcctattcatcgcatga
DBGET
integrated database retrieval system
