KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111799147
Entry
111799147         CDS       T05351                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111799147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111799147
   03041 Spliceosome [BR:cpep03041]
    111799147
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111799147
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111799147
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111799147
SSDB
Motif
Pfam: RRM_1 RRM_7 Pkinase_fungal
Other DBs
NCBI-GeneID: 111799147
NCBI-ProteinID: XP_023538334
LinkDB
Position
LG01:complement(2952700..2958537)
AA seq 435 aa
MDATKKRRMEENGVDSSENSFLKITSDDARKIIDRFTPDQLIDILQDAVSRHTDVLDAVR
SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSAYGELEEAVVIIDKATGKSKGYGFVTFKH
VDGAILALKEPSKTIDGRVTVTQLAAVGISGQNSNAADMSLRKIYVANVPMDMPADKLLA
HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG
KKGKPGGGQDGIQTPGAGQGNLHGDGMPMAPPSAMPGSGGQYGGPGGMGSYGGFSSGVQG
GQPLGHHPLNSSMGPGLSSVGGQAPSSLGSSGGYGGGPYGGGYGGPASSIYGGMGSVGGG
LGGSAGGLGGTGGPSSLYRLPQSSVGMPSGGYQDSGHYSMSSASGHPNPLHQQAVTSPAP
RVPPGGMYPSVPPYY
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggacgccaccaagaagcggaggatggaagaaaatggcgtcgactcctccgaaaattct
ttcttaaaaataacctccgatgatgctcgtaagataattgatcgtttcactccggaccag
cttatcgatattctccaagatgctgtttcgcgtcacacggatgtccttgatgcggttcga
tctattgccgaccgagacgtctcccagcggaagctgtttattcggggtcttagttgcgat
acaagtacagaaggtttgcgctctctcttttccgcgtatggggagcttgaagaagcggtt
gttattattgacaaggcgaccgggaaatcgaaagggtatggctttgtgactttcaagcat
gttgatggggctatactggctttgaaggaaccgagcaagacgattgatggccgtgttacg
gtaacgcaattggctgcagtgggaatttccgggcagaattcgaacgctgcggacatgtcg
ttgaggaaaatttatgtggcgaatgttccgatggatatgccggccgataaactgttggca
cacttttcgctgtatggagaaattgaggagggaccgctaggatttgataagcagacgggt
aagtgcagaggttatgctttatttgtgtacaagaagccagaaggggcacaggcagctctg
gtggatccaatcaagacgattgatggaaggcagttgagttgtaaattcgctaacgatggg
aagaaagggaaacctggcggtgggcaggatggaattcaaacgccgggggccggtcaaggg
aatttgcatggagatggcatgcctatggctcctccttcggcaatgcctggttcaggcgga
caatatggtgggccgggaggcatggggtcgtatggaggcttttctagtggcgtacaaggg
ggacagccactgggtcatcatccgctgaactcctcaatggggccgggtctatcttctgtc
ggtggtcaggctccatcttcgttgggaagctctggcggatatggcggcggtccatatggt
ggtgggtacggcggtcccgcgtcctcaatttatggtggtatgggtagtgtaggtggtggt
ttgggtggttctgctggtggattgggcggaaccggggggccatcatctctgtataggttg
ccacagagttcggtgggaatgccttcgggtggttatcaggatagtgggcattatagcatg
tcatcagcatctgggcacccaaatccgctccatcaacaggcggtaacatcaccggcgcca
cgtgttccgcctggaggaatgtatcccagtgtgccaccttattactga

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