Cucurbita pepo subsp. pepo (vegetable marrow): 111799264
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Entry
111799264 CDS
T05351
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111799264
Transcription machinery [BR:
cpep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111799264
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
111799264
NCBI-ProteinID:
XP_023538504
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Position
LG07:1259493..1264112
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AA seq
469 aa
AA seq
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MATSFRPNLKWSFQIQAHSRRSSSSKASPYASKGREASFGSGRLSFFSSICEEGEFIPRE
TFKTYTCLSEAPQTSADDLLDLKEIEINNKARPLGHLHYGLKCTRPSRVDDNFSAGTSLP
TGKASSFGMLMKNIDVLEETFAESGMLSLGRDGQNDLAIEDGGYHNVHPKTDGQNDDVVV
YSGKRAGRRSVKKRAVDNADKVASQPLTTRAAKEKFRNSSIFSRKRAFKRPTVARNEVEI
STGVKVVANLERIRETLEKETGKISSMSCWANAAGVDIKDLQKQLQFGWFCQDELLRTTN
SLVRFLSKKYRCSGLPMEDLVQAGAVGVLQGVERFDPKRGFRFSTYIHYWIRKSMSSVVA
RNSRVVIDQGNESDRKALNNGSSRYSDDDIAKATGLPLAKVRLVNNCLRVVGSIDQKRSD
GLNVKYMEFTADTSIQSPEETVTRKLMKIDIFNLLEGLESRERQVLLMR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaagtttcaggccaaatctcaagtggagttttcaaattcaggctcattctcgc
cggagctcctcttccaaggcttctccatatgcctctaaaggcagggaagcttcttttggt
tcaggaagactttccttcttctccagtatttgtgaggaaggagaatttatccctagagag
acctttaaaacgtacacttgcttgtccgaagctccacaaacctcggccgatgatctgtta
gatttgaaagagatagagataaacaataaggcaaggccactcggtcatttgcattacggg
ttaaaatgcaccaggccgtccagagtagacgacaatttttctgctggtacgagcttgcct
actggcaaagcgtcgtcttttggcatgttgatgaaaaacattgatgttttggaggaaact
tttgctgaatcaggcatgctaagcttgggaagagatggccaaaatgacttagccattgag
gacggtggatatcataatgtacacccaaaaacagatggccagaatgatgatgtcgtagtt
tactctggaaaaagagcaggaagaagatcagtaaaaaagagagcagtggataatgctgat
aaagttgcttcccagccgctaactacacgagcggctaaagaaaaatttcgtaattcctcg
atattttcaagaaaaagagcgtttaaaagaccgaccgttgcacgaaatgaagttgaaata
tccacaggggttaaggtagttgcaaatttagaaagaattagagaaactttagagaaggaa
actggaaaaatatcaagcatgagttgctgggccaatgctgctggtgttgatataaaggac
ctccaaaaacagctgcaatttggttggttctgtcaagatgaactcttaaggactactaat
tcattagttcggttcctttcgaagaaatatcgatgctctggactaccgatggaggactta
gttcaggctggagctgttggtgttctgcaaggtgtggaaaggtttgacccgaaaaggggt
tttagattctcaacctatatccattactggataaggaaatcgatgtcgagcgttgttgca
cgaaattcaagggtggtcattgaccaaggcaatgaatcagatcgaaaggccttgaacaac
ggtagtagtcgatattctgatgatgatatagcgaaggccactggtcttcctttggctaag
gttagacttgttaacaactgcttaagagttgtgggttcgattgatcagaagaggagtgat
ggcctaaatgtgaaatatatggaatttacagcagatacttcaatacaaagcccagaagag
accgtgacgcgaaaactcatgaagatcgacatctttaatcttcttgaagggttggaatca
agggagaggcaggtcctgcttatgcgataa
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