Cucurbita pepo subsp. pepo (vegetable marrow): 111799636
Help
Entry
111799636 CDS
T05351
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111799636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111799636
03009 Ribosome biogenesis [BR:
cpep03009
]
111799636
04131 Membrane trafficking [BR:
cpep04131
]
111799636
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111799636
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111799636
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111799636
Membrane trafficking [BR:
cpep04131
]
SNARE
SNARE associated proteins
Others
111799636
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111799636
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111799636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
AAA_lid_PRS2_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
RNF220
Motif
Other DBs
NCBI-GeneID:
111799636
NCBI-ProteinID:
XP_023538826
LinkDB
All DBs
Position
LG08:8267540..8271731
Genome browser
AA seq
805 aa
AA seq
DB search
MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQI
FKACLRKSPISKDVELRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRKSEN
PEAMEEDADDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGAEFRFSE
QSSGPTASDPFATSAGGADEDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaagctgaatcgtcagactccaaaggtacgaagagagacttcagtaccgcc
attttggagcggaagaaagccccaaatcggcttgttgtcgatgaagcaatcaacgatgat
aactcggtggtcgcgcttcatcctgataccatggagaagcttcaactcttccgtggggat
acgatcctcatcaagggtaagaagagaaaggacacaatatgcattgctctagctgatgat
acatgtgatgagcctaaaataaggatgaacaaggttgtgagaagcaatcttagggttagg
cttggtgatgttgtctctgtgcaccaatgtgctgatgttaagtatggaaagcgtgtacat
attcttcctgtggatgataccattgaaggagttactggaaacctttttgatgcgtattta
aaaccctatttcttggaggcatatcgtcccttgaggaagggtgatctcttccttgtgaga
gggggaatgaggagtgtagagttcaaggttattgagaccgatccagctgaatactgtgtg
gtagccccagacactgagatcttttgtgaaggagagcctgtgaaaagggaggatgaggat
agattagatgaagttggttatgatgatgttggtggagttaggaaacaaatggctcagatt
cgtgaattggtcgagctgccattgaggcatccacagctatttaaatcaattggtgtgaag
ccgcccaagggaattttgctgtatggaccacctggttcaggtaagactttgattgcacgt
gctgttgccaacgaaactggtgcatttttcttctgtatcaatggacctgaaatcatgtca
aagttggctggtgaaagtgaaagcaacctcagaaaagcttttgaggaagcagaaaagaat
gcgccatctattattttcattgatgaaattgattcaattgctcccaagcgagagaagacc
aatggggaagttgagcgaagaattgtctcacagctactgacactcatggatggattgaag
tctcgtgcacatgtcattgtgattggtgctacaaatcgacccaacagcattgacccagct
ctgagaagatttggaagatttgatagggaaatagatattggtgtgcctgatgaagttggg
cgtctagaagttctacgcattcatactaagaacatgaagcttgctgaagaagttgattta
gagaggattgccaaagatacacatggctacgttggtgctgatttggccgctctctgtacc
gaggctgctcttcaatgtattagagagaagatggacgtaatagacttggaagacgactct
atcgatgctgagatactcaactcaatggcagttacaaatgagcatttccagacagctctt
ggaaccagcaacccgtcagctcttcgtgaaacagttgttgaagttcctaatgtttcatgg
gaggacattggaggtcttgagaatgttaaaagggagcttcaagagacggttcaatatccc
gtcgaacaccctgagaaatttgagaaattcgggatgtcgccctcaaaaggagttcttttc
tatggccctcctggatgtggaaagactcttctggcgaaggctattgcaaatgaatgtcaa
gcaaacttcattagtgtcaagggtccagagttgctcactatgtggtttggagaaagtgag
gccaatgttcgtgaaatcttcgacaaggcccgccagtctgctccttgtgtcttgttcttt
gatgaactcgactcaatcgctacccaaaggggtagtagcgttggggatgctggaggtgct
gctgatcgtgtactgaaccaacttctcacagaaatggatggaatgtcagcaaagaagact
gttttcatcatcggtgccaccaacagaccagacatcatagatcccgctctgttacgtcct
ggacgtctcgatcagttaatttatattcctcttcctgacgaagaatctcgccttcaaatt
ttcaaggcttgcttgagaaaatctccaatctccaaagatgtagaactcagagcccttgcc
aagtacactcaaggcttcagtggtgctgatatcacagagatctgtcagcgtgcctgcaaa
tatgctatcagagagaacattgagaaggatattgagaaggagaggaggaaaagcgagaac
ccggaggccatggaggaggatgcagatgacgaagtggccgagatcaaagctgctcacttt
gaggaatctatgaagtatgcacgaaggagtgtgagcgatgctgacatccgcaaataccag
gcatttgcacaaacacttcagcagtctagaggctttggagccgagttcaggttctcggag
cagagctcgggaccgactgcatctgacccatttgcaacttcagctggtggggctgatgaa
gatgacctctacaactag
DBGET
integrated database retrieval system
