Cucurbita pepo subsp. pepo (vegetable marrow): 111799658
Help
Entry
111799658 CDS
T05351
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111799658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111799658
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111799658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
111799658
NCBI-ProteinID:
XP_023538856
LinkDB
All DBs
Position
LG08:6257786..6261674
Genome browser
AA seq
225 aa
AA seq
DB search
MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADALDLHDGDDEPKSAAAAA
TATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKM
QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL
VETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcgaaggacccatttgaagcggcgtttgaggagcaggaggaatctccaccg
aactccccctccgctgccgatgatctcgaaattcagaccaacgttgctgccaccgccgat
gccgacgctcttgatttgcacgatggtgatgatgaaccaaaatccgccgccgccgccgcc
accgccacaaattccggtattccttctgcatccactacttctttgtttgtttcgtcttcc
tccaatgtctctgccgcacctaaaaccaaagaagacgacgatgaagaagaggaagagaat
gtcgaagtggagctcgctaaattcccctcgagcggcgatccagataagatggcgaagatg
caagccattctttcacaatttacagaagaacagatgagtcgttacgagtccttccgcaga
gctggatttcagaaagctaatatgaaaaggctattagcaagcatctcaggaacacagaaa
atttctgtaccaatgacgatcgtagtgtctgggatagcaaagatgttcgttggtgaactt
gtagaaacggctagagtagtaatgactgagcggaatgattctggagctatcaggccatgc
catctcagagaagcatatagaagactaaagcttgaaggtaagattccaaggaagtcagtg
cctagactctttcgctaa
DBGET
integrated database retrieval system
