Cucurbita pepo subsp. pepo (vegetable marrow): 111799751
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Entry
111799751 CDS
T05351
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111799751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111799751
Spliceosome [BR:
cpep03041
]
Complex C
Other components
Step II factors
111799751
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
111799751
NCBI-ProteinID:
XP_023538979
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Position
LG08:2089659..2094094
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AA seq
536 aa
AA seq
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MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGALTHDAKSCMERPRKIGAKW
TNMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERYEARDEARRKFLKEQQLKKLE
EKNNKQNEDAEVSDEDEDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYVGDNQNRISGQALDFKQLNV
HAWEAFDKGQDIHLQAAPSQAELLYKNYKVIKEKLKSHTKDAIMEKYGNAADEEKLPREL
LLGQSERQVEYDRTGRIVKGLEMALPKSKYEEDVFINNHTGVWGSWWKDHQWGYKCCKQT
IRNSYCTGAAGIEAAEAAADLMKSNIARKATSEDTPAPAEEKKLATWGSEVPDDLVLDQK
KLNEALKKEDERRKEERDERKRKYNVRWNDEVTAEDMEAYRMKKVRHDDPMKDFLN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagttgctttcaaatctagggaggatcatcgcaaacaacttgaatta
gaggaagcacgtaaggcagggcttgcgccagctgaggtcgatgaagatgggaaagaaatc
aaccctcacattccccaatatatgtcctctgccccttggtatcttaatgctgagaggcca
agtttaaaacatcaaaggaaatggaaatcagatccgaattatacaaaatcctggtacgat
agaggtgcaaaaatacatcaggcagacaagtacaggaagggtgcatgtgaaaattgtgga
gcattgacacatgatgctaagtcatgcatggaaagaccccgaaagattggagcaaaatgg
acaaatatgcacatagcaccagatgagaagattgagacatttgaactagattatgatggg
aaaagggatcgttggaatggctatgatccagcaacctatgctcgtgtcattgagaggtat
gaggctagagatgaagcaaggagaaaatttttgaaagaacaacagcttaaaaaattggaa
gagaaaaataataagcagaatgaggatgctgaagttagtgatgaagatgaggatgaagat
gatttgaaggttgatgaggcaaaggttgatgaaagcaaacaaatggactttgcaaaagtt
gagaagcgtgttcgtacgacaggtggtggaagcacgggaactgtaaggaacttgcgtatt
cgggaggatacagcaaaatatcttttaaatcttgatgtcaattctgcttattatgatccg
aaaactcggtccatgcgtgaagatcctcttcctgatgctgatccaaatgaaaaattttat
gtgggcgataaccaaaatagaataagtgggcaagctttggatttcaagcaactcaatgtg
catgcttgggaagcatttgacaaaggtcaagatatccatctacaagctgctccatcccaa
gctgaacttctttataagaactacaaggttatcaaagagaagttgaagtcacatacgaag
gatgctatcatggagaagtatggcaatgctgctgatgaagaaaagctgcctcgagaactt
ttgctgggacagagtgagagacaagttgaatatgaccgcactggcagaattgttaaaggc
ctggaaatggctcttcccaaaagtaaatatgaagaagatgtttttattaataaccacacg
ggtgtttggggttcatggtggaaggatcaccagtggggctataaatgctgtaagcagacc
atccgtaacagttattgcactggggctgctggaattgaggctgctgaggcagcagcggac
ttaatgaagtctaatattgctcgtaaagcaacttctgaagatacaccagccccagctgaa
gagaaaaagctagctacttggggaagtgaagtacctgatgatctcgtcctcgaccagaag
aaacttaatgaagctctcaagaaggaggatgaaagaaggaaggaggagagggatgaaaga
aagcgtaaatacaatgtgagatggaatgatgaggtaactgcggaggacatggaggcatat
aggatgaagaaggtacgtcatgatgatcccatgaaggattttcttaactaa
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