Cucurbita pepo subsp. pepo (vegetable marrow): 111799890
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Entry
111799890 CDS
T05351
Name
(RefSeq) auxin response factor 1-like
KO
K14486
auxin response factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111799890
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
111799890
NCBI-ProteinID:
XP_023539154
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Position
LG08:complement(9539592..9547598)
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AA seq
678 aa
AA seq
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MSFSAVSSLPPGGPTSGPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASM
HQGLEQQMPSFNLPSKILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEP
TRCNVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQWHF
RHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSV
ISSHSMHLGVLATASHAVSTGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKM
RFEGEEVPERSFSGTIVGLGDNASPGWANSDWRSLKVQWDEPSSILRPDRVSSWELEPLV
ASSPLSSLPAQRNKRPRPAVLPSPSADAAVLGGWKPTVESSAFSYTEPQRGRDLYSSPKF
STAASNSLGFNGNNSLGAVSSNAYWSNTSMVENVMDTSSHGAKREPVEKKQNTRNGCRLF
GFQLLGNSNVEEASPVSTPKMVGEDRPVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSC
LISPLESQSRQIRSCTKVQMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKK
WKVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTTEEVKRLSPKIKLPLSGEMKLSKPDS
DMVANHTEDQSSISGSDC
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcagctgtctcaagtcttcccccaggaggacccacttcagggccctcttca
gatgcattgtatagggaattatggcatgcctgtgctggaccgcttgtcacccttcctcgc
caagatgaacgagtatactactttccacagggtcacatggaacagctggaagcatcaatg
catcaaggattagagcaacaaatgccttcgttcaacctaccatcaaaaatactttgtaaa
gttgtcaatgttgttcttcgggcggaacctgacacagatgaagtgtatgctcagataact
ctgttaccggaaagcaatcaaagtgaagtaacaagcccagatcctgcccttcctgagcct
acaagatgtaatgtccactcattttgcaagacgctcactgcttctgacactagcactcat
ggtggcttctctgttcttaggaggcatgcggatgactgccttccacctctggatatgtct
cagcagccaccgtggcaagaattggttgcgagtgacttacatgggaatcagtggcatttt
cggcacattttcagaggtcaaccaaggcgtcatttactaacaactgggtggagcgtcttc
gttagttccaaaaaactagtagctggagatgcttttatctttttaagaggtgaaaatgga
gagcttcgtgttggggtgagaagactcatgagacagctaaataatatgccatcttctgtt
atatccagtcacagcatgcatctcggagttctagctactgcttctcatgctgtttcaact
ggaacactcttttctgttttttataagccacgaacaagcaggtctacatttcttgtgagt
ctaaacaagtaccttgaagctcaaaaccataaactctctgttgggatgaggttcaagatg
aggtttgaaggcgaggaggttcctgaaagaagttttagtggaacaattgttggtcttgga
gataatgcatcgcctggatgggctaattctgactggcgatctctaaaggtgcaatgggat
gagccttcatctattctgcgtccagatagggtgtcttcctgggaattggagccacttgtt
gcatctagccctctaagctctctgcctgcacagaggaacaagcgtccacgaccagctgtt
ttgccttccccttccgcagatgcagctgtactcggtgggtggaaacctacggttgaatct
tctgctttttcatataccgagccgcagcggggaagggacctatattcttcaccaaagttc
agtactgctgcttcaaattcacttggttttaatgggaataattctcttggcgctgtgtcc
agcaacgcctactggtctaataccagtatggtggaaaatgttatggacacttcatctcat
ggagcaaaaagagaacccgttgaaaagaaacagaacactaggaacggatgcaggctcttt
gggttccagcttcttggaaactccaatgtagaggaagcttctccagtttcaacaccaaaa
atggtgggcgaggataggccagttccacctatagatacagcatttgaccagcattttgac
ccatcgaacattcaccgatcagatatgccttcagtaagctgtgatgctgataaatcatgc
ctgatttcccctctagagtctcaaagcagacaaatccgcagctgcacaaaggttcaaatg
caaggaattgctgttgggagggccgtagatttaacacggttcaatcaatatgatgatcta
cttaggaaactggaggagatgtttgacatagagggtgagctttgtggctcggtaaagaaa
tggaaggttgtttacaccgatgatgaagatgatatgatgatggttggagatgatccttgg
aacgagttctgcagcatggtaaggaagatattcatctacacgacagaagaagtgaagaga
ctgtcgcccaagataaaactcccactcagtggagagatgaagctcagcaagccagattct
gatatggttgccaaccatacggaggatcaatcgtccatcagcggatcagattgctga
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