Cucurbita pepo subsp. pepo (vegetable marrow): 111799933
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Entry
111799933 CDS
T05351
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111799933
03036 Chromosome and associated proteins [BR:
cpep03036
]
111799933
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111799933
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111799933
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111799933
microRNA pathway
RISC loading complex
111799933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
111799933
NCBI-ProteinID:
XP_023539231
LinkDB
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Position
LG08:complement(1866714..1873053)
Genome browser
AA seq
979 aa
AA seq
DB search
MPVRQMKESSEQHLVIKTHLQNSVQKPQKSTQNGKGPPNLEHQTIKCRNPSSPPSKNRGR
RRSRGGRKSDQGEVYMRPSSRPCTVARKPDEPEFNAGALVASTNPNGGNICGMEMGYRNS
SKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELV
RLYRDSELGERLPAYDGRKSLYTAGELPFVWKEFNIKLVDEEDGVSGPKRERDYKVVIKF
VARANLQYLGQFLAGKRANAPQEAIQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGD
GLESWRGFYQSIRPTQMGLSLNIDMASAAFIEPLPILEFVAQLLGKDVLSRPLSDSDRVK
IKKALRGVKVDVTHRGNVRRKYRISGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTI
QHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDIL
KTVQHNAYNNDPYAKEFGINVSEKMTSVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMN
KKMINGMTVSRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNTEPVIPIYNARPEQV
EKALKHVYHASMNKTKGKELELLLAILPDSNGSLYGDLKRICETDLGLISQCCLTKYVFK
ISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSI
AAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKAT
GQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLELNYQPPVTFIVVQKRHHTQLFA
NNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT
ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPEMQENGTSGRSAKSAT
GVRPLPALKENVKRVMFYC
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgccagtacggcaaatgaaagagagctccgagcagcatcttgtaatcaaaacccacttg
cagaactctgttcaaaaacctcaaaaatcaacccaaaatggcaaaggcccgccgaatctg
gaacatcaaaccatcaaatgtcgaaacccatcttctcctccgagcaaaaacagaggcagg
agaagaagcagaggcggccggaaatccgatcagggggaagtttacatgagacccagttct
cggccctgcacagtggcgcgtaaaccagatgaaccggaatttaacgccggagctctggtg
gcaagtactaatccaaatggtggtaacatttgtggaatggaaatgggttatcgaaattca
agcaagtccttgagttttgccccaaggcctggattcggacaagttgggacaaaatgtatt
gtgaaagcaaaccatttctttgcagagttacccgacaaagatttgaatcaatatgatgtc
acaattactcctgaagtggcatcaagaactgtgaacagagccatcatggctgaattggtg
agattatacagagactctgagctgggagaaagattaccagcttatgatggcagaaagagt
ctgtatacagctggtgagcttccttttgtatggaaagagtttaacatcaagcttgtggat
gaagaagatggagtcagtggtcccaagagggagagggattataaagtggtcattaagttc
gttgcaagggcaaatttgcagtatttgggtcagttccttgccggtaagcgtgccaatgca
ccacaagaagccattcaaatactggacattgtcttgagagagctatcatccaaaaggtac
tgtcctataggaagatccttcttttctcctgatatcaggtcacctcaacgtctcggtgat
ggcctagaatcatggcgcggtttttaccagagtataaggcctactcaaatgggactgtct
ctgaacattgatatggcttcagctgcattcatcgagcctctccctatcctcgagtttgtt
gctcagcttctcgggaaagatgttttgtctcggccactgtctgattccgatcgcgttaag
atcaaaaaggctcttagaggggtgaaagtcgacgtaacgcaccggggtaatgtaaggcgt
aagtatcgtatttcggggctaacgtcacagcctacaagagagctagtgtttcctgttgac
gacaactcgaccatgaagtcggttgtcgagtacttccaggagatgtatggcttcaccatc
caacatgctcatctgccttgccttcaagtaggaaatcagaagaaggccaattatttacca
atggaggcctgcaaaattgttgggggacaaaggtatacaaagagattgaatgagaaacaa
ataactgcacttctgaaagtcacatgtcaaagaccgagggatcgagaaaacgacattctg
aagactgttcaacataatgcctataacaacgatccttatgcaaaggagtttgggataaat
gttagtgaaaagatgacttctgttgaagctagaattcttcctcctccatggctgaaatac
catgatactggaaaagagaaggattgcttgcctcaagtgggtcaatggaatatgatgaat
aagaaaatgattaatggaatgacggttagtcggtgggcgtgtatcaacttctctaggagc
gtgcaggagagcgttgctcgtggattttgttctgaacttgctcaaatgtgtcaagtgtct
ggaatggaattcaatacagaaccagttattccaatatacaatgctaggccagaacaagta
gagaaagctttgaagcatgtttatcatgcttccatgaacaagactaaaggaaaagagtta
gagctattattagctatcttacccgacagtaacggatcgctttacggtgatcttaagcga
atctgtgagacggatcttggtttaatatcacaatgctgtcttacaaaatatgtgttcaag
attagtaaacagtatcttgctaatgtttcattgaagatcaatgtcaagatgggtggtaga
aacactgttcttctagatgctatcagctgcaggataccgctcgtaagcgacataccgact
ataatatttggagcagacgtgactcatccagagaacggcgaagattcgagcccttcgata
gctgctgttgtagcatctcaggattggcctgaagtgacaaagtatgctggactagtatgt
gctcaggctcatagacaagaacttatacaagacttgtacaaaacttggcaggatcctgtc
cgtggcaccgtcagcgggggcatgatcagggatcttctggtttcgtttaggaaagcaaca
gggcagaagcctctaagaataatattttacagggatggcgttagtgaaggacaattctat
caagtattactttacgagttagatgcaatcaggaaggcatgtgcttctttagaactgaat
taccagccacccgtgacgttcatcgtcgtacaaaaacgacatcacacccaactgtttgcc
aacaaccatagagacagaagtagcacagacaggagtggaaacattttacctggcaccgta
gtcgactccaaaatatgccacccgacagaatttgatttctatctttgtagccatgctgga
attcaggggacaagccgaccagctcattaccatgttctttgggatgaaaacaattttaca
gcagatgggattcagtccttaaccaataatctttgctacacgtatgcaaggtgtacgcgt
tcggtttctatcgtccctccagcatactatgcacatttagcagcattccgagctcgattc
tacatggaaccagagatgcaagagaatggcacgagcggtcgttctgctaagagtgcgacc
ggggttcgccctttgccagctctaaaggaaaatgtgaagagagtaatgttttactgttag
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