Cucurbita pepo subsp. pepo (vegetable marrow): 111800043
Help
Entry
111800043 CDS
T05351
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00906
Carotenoid biosynthesis
cpep01100
Metabolic pathways
cpep01110
Biosynthesis of secondary metabolites
Module
cpep_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
111800043
Enzymes [BR:
cpep01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
111800043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
GDI
FAD_binding_2
HI0933_like
FAD_oxidored
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
111800043
NCBI-ProteinID:
XP_023539389
LinkDB
All DBs
Position
LG08:complement(7428531..7435830)
Genome browser
AA seq
625 aa
AA seq
DB search
MAVLRSLSMLGLPLNSPSAVYNSHFDLDFGCKTPLYFHLSNKKIVDRNKPRCQKPRNLQA
KFLDTGFSGVNLRSEKFIVRTKSVLSVDEAVESDGDRTAGGSEEKSHYDAIVIGSGIGGL
VASTQLAVKGAKVLVLEKYVIPGGSSGYYQRDGYTFDVGSSVMFGFSDKGNLNLITQALS
AVGCEMQVIPDPTTVHFHLPTNLSVRIHREYSEFIEELVSNFPHEREGVLKFYGACWKIF
NALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDVARKYIKDPRLLSFIDAEC
FIVSTVNALQTPMINAAMVLCDRHFGGINYPIGGVGGIAMSLAKGLVDQGSSIMYKANVT
KIITENGKAVGVKLSDGREFFAKTIVSNATRWDTFGKLLKGVDLPKEEENFQKLYVKAPS
FLSIHMGVKAEVLPPDTDCHHFVLESDWRRLEEPYGSIFLSIPTVLDASLAPEGRHILHI
FTTSSIEDWEGLSRKEYEEKKEQIANEIISRLEKKLFPGLKSSIDFMEIGTPKTHRRFLA
RNNGTYGPMPRGTPKGLLGMPFNTTGIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAAD
IGLEKKSPILDAALLRLLGWLRTLA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctgttctccgctcactttccatgcttggtttgccgcttaattctccatctgctgtt
tataattcccattttgacttggattttgggtgcaaaacccctctgtattttcatttgagt
aacaaaaaaattgtagataggaacaaacccagatgccaaaaacccagaaatttgcaagct
aaatttcttgatacaggcttctctggggtgaatttgagaagtgaaaagttcatcgtgagg
acaaaatctgtattgagcgttgatgaagctgtggagagcgacggcgatagaacagcagga
ggaagcgaggagaagagccattatgatgctattgttattgggtcaggtattgggggctta
gttgcttctactcaattagcagtgaaaggagctaaggtgttggttttggagaagtatgtg
attcctggtgggagctctggttattatcagagggatggctatacttttgatgttggatct
tctgtaatgtttggtttcagtgataagggaaatctaaatttaattacacaagctttgtca
gccgtcggttgtgagatgcaagtgattcccgatccaaccactgttcatttccatctacct
acgaatctttcggtaaggattcaccgagaatacagtgaatttatcgaagaacttgttagc
aattttccccatgaaagagaaggagtcctcaaattctatggagcctgttggaagatattc
aatgctttaaactcattggaattaaaatcgctggaggagccgatataccttttcggacag
ttctttcagaagcctcttgaatgcctgacacttgcgtactacttgcctcaaaatgctgga
gacgtggctcggaagtacattaaggatccccgtctattgtcgtttattgatgcagagtgt
tttatcgttagcacggtgaatgctttgcaaacaccaatgataaatgcagccatggtttta
tgtgacaggcattttggtgggataaactaccctattggtggtgttggtggaattgcaatg
tccctggcaaagggtctcgttgatcagggcagctcgataatgtataaagctaacgtaacg
aagataataaccgaaaatggaaaagctgtaggtgtgaagctgtctgatggaagggagttc
tttgctaaaactatagtatcaaatgctaccagatgggatacctttggaaagctgttaaaa
ggagtggaccttcccaaggaagaggagaactttcagaaactttatgttaaggccccatct
tttctttcaattcatatgggggtgaaagctgaggttttaccgcctgacacagattgtcac
cactttgttcttgagagtgattggagaaggttagaggagccctatggaagcatctttctg
agcatcccgactgttctcgatgcatcgttggctccggagggacgtcatatccttcacatt
tttaccacttcttccatagaggattgggaggggctctccagaaaagaatacgaagagaag
aaggagcaaattgcaaatgaaatcatttctagactagagaagaaattatttcccggctta
aaatcatctattgattttatggagattgggacaccgaagacacacagacgattcctagct
cgtaataatggtacctatggaccgatgccacggggaacccctaagggattacttggaatg
ccatttaatacaactggtatagatgggctgtattgtgtcggtgatagctgctttcccgga
caaggagtaatagctgtagccttttccggagtgatgtgtgcgcatcgagtagctgctgat
atcgggcttgaaaagaagtcccccattttggatgctgctcttcttcggctactcggttgg
ttaaggaccttggcttga
DBGET
integrated database retrieval system
