Cucurbita pepo subsp. pepo (vegetable marrow): 111800075
Help
Entry
111800075 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111800075
KO
K10756
replication factor C subunit 3/5
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030
DNA replication
cpep03410
Base excision repair
cpep03420
Nucleotide excision repair
cpep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111800075
03410 Base excision repair
111800075
03420 Nucleotide excision repair
111800075
03430 Mismatch repair
111800075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpep03032
]
111800075
03036 Chromosome and associated proteins [BR:
cpep03036
]
111800075
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111800075
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111800075
DNA Replication Termination Factors
ELG1-RFC complex
111800075
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111800075
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111800075
Check point factors
HRAD17(Rad24)-RFC complex
111800075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
Rad17
AAA_22
nSTAND3
DNA_pol3_delta2
RsgA_GTPase
AAA
Motif
Other DBs
NCBI-GeneID:
111800075
NCBI-ProteinID:
XP_023539425
LinkDB
All DBs
Position
LG08:2937663..2941884
Genome browser
AA seq
450 aa
AA seq
DB search
MAATQQQQQPNSSSSSSSLRRSLSDSNTRRRQRRRGSISTASFSSKSSWSSKLAKLLARL
NLFSRNSDLTEETLQAHNERIDDLDKTPLKSSPYYRGLTDSSLAINYHHGPLTTTHVTTT
GPHHYASSTTTAQTQTSLSYAVVSKLKEWAPCLIGKPNTKPPAHNQHETPMTTTVVGKTT
SLVASSSPEKIERWATEKEEKLLRERLVMYGRREGGSGVGVDGGGEAAEKERYTWGDKYR
PKVLEDFICNRKTACELKKVVEEKGCGHYIFEGPPGVGKRTMIQAMLRQAFGEQAMEVKE
VDRVFALKSEMVGSIEVKVKESSHCVEVNLSQTKGFEKQVIDQLIKETQSPLPCNHARCR
GILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLLLSSFCTHVHLSPPSKQE
MKTKIGGEGMNEKGFLVDVTVLHRCGLVLL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacacaacaacaacaacaacccaactcctcctcctcctcctcctctctccgc
cgttccctgtcagactccaacacgcgccgccgccaacgccgccgtggcagcatctccaca
gcctccttctcctcaaaatcctcctggtcctcaaagctagccaaactcctagcccgtctc
aacctcttctcccggaactccgacttgacggaagaaaccctccaagcccataacgaacga
atcgacgacctcgataaaaccccccttaaatccagcccttattaccgcggcctcactgac
tcctccctcgccatcaattaccaccatggcccactcaccaccacccacgtcaccaccact
ggtccccaccactacgccagctcaacaaccacggcccaaactcaaacctctctctcatac
gccgtcgtttcaaaactcaaggagtgggccccatgccttataggaaaacccaatacgaag
ccgccagctcataatcaacacgaaactccaatgacgacaacagttgtgggtaaaacgacg
tcgttggttgcttcgtcgtctccggagaagattgagaggtgggcgacggagaaggaagag
aagctgttgagggagagattagtaatgtacgggcggagagagggagggagtggagtgggg
gtagacggcggaggagaggcggcggagaaggagaggtacacgtggggggataaatacagg
ccaaaagtgctggaggattttatatgcaatcggaaaacggcgtgtgagttgaagaaagtg
gtggaggagaagggatgtgggcattatatattcgaaggaccgccgggagttgggaaaagg
acgatgattcaagctatgctcagacaggctttcggcgaacaagcaatggaggtcaaggaa
gttgatagagtttttgccttgaagagtgaaatggtggggagcattgaagtaaaggtgaag
gaatcatcccactgtgtggaagtcaatctctcacaaaccaaaggctttgagaaacaagtc
attgaccagctcatcaaagaaactcaatcccctttgccatgtaatcatgccagatgtcga
gggatattgttatgtgaagcagatcagctatcaaatgaaaccctaatgtacgtaaaatgg
gcaattgagaggaacaaagggtgcagcaaaatcttcttctgttgctctgatgtctctaag
cttcttcttcttagctctttctgcactcacgttcatctctccccaccttcaaagcaagag
atgaaaactaaaataggaggtgagggtatgaatgagaaaggcttcctcgtcgacgtcact
gtcctacatagatgtggtctagtgttgttatga
DBGET
integrated database retrieval system
